RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 DRG1Q9Y295 367 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 L3MBTL1Q9Y468 752 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 CFAP73A6NFT4 308 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 FZD9O00144 591 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 KRT16P08779 473 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 VGLL4Q14135 290 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 TFDP1Q14186 410 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 PREPLQ4J6C6 727 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 CEP128Q6ZU80 1094 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 GBP7Q8N8V2 638 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 SLC35B2Q8TB61 432 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 ZNF518BQ9C0D4 1074 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 METTL5Q9NRN9 209 aaKnown RBP15.31■□□□□ 0.04
ACTN1-211ENST00000553882 SHOC2Q9UQ13 582 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 SSC5DA1L4H1 1573 aa15.31■□□□□ 0.04
ACTN1-211ENST00000553882 ZBTB42B2RXF5 422 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 PIK3R2O00459 728 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 ALOX15BO15296 676 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 GPX6P59796 221 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 SLC1A5Q15758 541 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 FNBP1LQ5T0N5 605 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 IER5Q5VY09 327 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 HSPH1Q92598 858 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
ACTN1-211ENST00000553882 PHTF1Q9UMS5 762 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 PCDHGC3Q9UN70 934 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 TCRBV7S3A2A0A539 114 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 TNNC2P02585 160 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 KRT4P19013 534 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 CLCN3P51790 818 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 TAP1Q03518 808 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 ATF7IP2Q5U623 682 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 CDCA2Q69YH5 1023 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-211ENST00000553882 POTEAQ6S8J7 498 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 NIPA2Q8N8Q9 360 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 PYROXD1Q8WU10 500 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 CPT1BQ92523 772 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 ANKRD36BP1Q96IX9 119 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 TWNKQ96RR1 684 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 SPATC1LQ9H0A9 340 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 MINDY3Q9H8M7 445 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 CLUHO75153 1309 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 GOLGA8RI6L899 631 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 CDH5P33151 784 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-211ENST00000553882 SPARCL1Q14515 664 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 MXD4Q14582 209 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-211ENST00000553882 MPZL3Q6UWV2 235 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 FAM71DQ8N9W8 422 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.045e-7■□□□□ 8.5
ACTN1-211ENST00000553882 DENND1AQ8TEH3 1009 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 RSAD2Q8WXG1 361 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 C12orf65Q9H3J6 166 aaKnown RBP15.3■□□□□ 0.04
ACTN1-211ENST00000553882 SMYD3Q9H7B4 428 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 STRIP2Q9ULQ0 834 aa15.3■□□□□ 0.04
ACTN1-211ENST00000553882 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-211ENST00000553882 WDR91A4D1P6 747 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 SIGLEC16A6NMB1 481 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 ERBB2P04626 1255 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 NFICP08651 508 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 EZRP15311 586 aaKnown RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 EDNRBP24530 442 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 SLC8A1P32418 973 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 NR1H3Q13133 447 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 GRM1Q13255 1194 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 GADL1Q6ZQY3 521 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 UNC45BQ8IWX7 931 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 COPS5Q92905 334 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 KLF6Q99612 283 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 WDR83Q9BRX9 315 aaKnown RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 SDCBP2Q9H190 292 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 PSMC3IPQ9P2W1 217 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 MGAMO43451 1857 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 IQCF3P0C7M6 154 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 FGFR1P11362 822 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 KDELR1P24390 212 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 PTPN7P35236 360 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 RPL22P35268 128 aaKnown RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 YWHAEP62258 255 aaKnown RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
ACTN1-211ENST00000553882 BBS9Q3SYG4 887 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 ACCSLQ4AC99 568 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 WLSQ5T9L3 541 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 POLNQ7Z5Q5 900 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 TDRPQ86YL5 185 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 RIOX2Q8IUF8 465 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 KCTD6Q8NC69 237 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 ERP27Q96DN0 273 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 GPR20Q99678 358 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 PLCD4Q9BRC7 762 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
ACTN1-211ENST00000553882 PRPF4O43172 522 aaKnown RBP eCLIP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 USP2O75604 605 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-211ENST00000553882 TMEM63AO94886 807 aa15.28■□□□□ 0.04
ACTN1-211ENST00000553882 KRT7P08729 469 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms