RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 P4HA1P13674 534 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 AKAP5P24588 427 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ANXA13P27216 316 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 SOX5P35711 763 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 PPM1AP35813 382 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 YWHAEP62258 255 aaKnown RBP15.45■□□□□ 0.06
SHMT2-208ENST00000553868 NOP14P78316 857 aaKnown RBP15.45■□□□□ 0.06
SHMT2-208ENST00000553868 RBP5P82980 135 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 APBA1Q02410 837 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 LPAL2Q16609 132 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ARHGAP44Q17R89 818 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ZNF699Q32M78 642 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 XKR4Q5GH76 650 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 GJB7Q6PEY0 223 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 TSSK4Q6SA08 328 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ALKAL1Q6UXT8 129 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 VPS36Q86VN1 386 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ARHGEF19Q8IW93 802 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 HELQQ8TDG4 1101 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 RPS6KC1Q96S38 1066 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 EPC1Q9H2F5 836 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 DEF6Q9H4E7 631 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 SLC38A7Q9NVC3 462 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 TMEM161AQ9NX61 479 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 DPP3Q9NY33 737 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 SSU72P8A0A1W2PR75 194 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 SPDYE4A6NLX3 237 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 LAMTOR5O43504 91 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 OFD1O75665 1012 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 CYP3A5P20815 502 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 PMLP29590 882 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 GBP2P32456 591 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-208ENST00000553868 KLHL30Q0D2K2 578 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 ZNF528Q3MIS6 628 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 TDRD12Q587J7 1177 aaKnown RBP15.44■□□□□ 0.06
SHMT2-208ENST00000553868 WDR59Q6PJI9 974 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 DCLRE1AQ6PJP8 1040 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 TMEM173Q86WV6 379 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-208ENST00000553868 VPS52Q8N1B4 723 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 C1orf127Q8N9H9 656 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 KIAA1524Q8TCG1 905 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 CCDC42Q96M95 316 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 PI4K2AQ9BTU6 479 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 NIF3L1Q9GZT8 377 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 SFXN1Q9H9B4 322 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 MTF2Q9Y483 593 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-208ENST00000553868 PCDHGA2Q9Y5H1 932 aa15.44■□□□□ 0.06
SHMT2-208ENST00000553868 SMIM28A0A1B0GU29 152 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 MEFVO15553 781 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ZSCAN12O43309 604 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 STAU1O95793 577 aaKnown RBP15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ITGB3P05106 788 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 PRKCIP41743 596 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 MYL6P60660 151 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 FAM189BP81408 668 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 MYO1EQ12965 1108 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 CUL2Q13617 745 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 PTPN14Q15678 1187 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ZBTB6Q15916 424 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ZNF667Q5HYK9 610 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 N4BP2L1Q5TBK1 243 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ECHDC2Q86YB7 292 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 LRRC43Q8N309 656 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ZBTB44Q8NCP5 570 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 NETO1Q8TDF5 533 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 SHC3Q92529 594 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 MYADMQ96S97 322 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 ZBP1Q9H171 429 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 FAM124BQ9H5Z6 455 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-208ENST00000553868 VRTNQ9H8Y1 702 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 NHEJ1Q9H9Q4 299 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-208ENST00000553868 DOCK8Q8NF50 2099 aa15.43■□□□□ 0.06
SHMT2-208ENST00000553868 SOWAHDA6NJG2 315 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 GDF9O60383 454 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 GFPT2O94808 682 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 ZIC2O95409 532 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-208ENST00000553868 CST3P01034 146 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-208ENST00000553868 PROS1P07225 676 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 CCDC175P0C221 793 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 POLR2BP30876 1174 aaKnown RBP15.42■□□□□ 0.06
SHMT2-208ENST00000553868 PNPLA4P41247 253 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 BPIFB4P59827 614 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 KRT83P78385 493 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 ARID5AQ03989 594 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-208ENST00000553868 SPA17Q15506 151 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 TXLNBQ8N3L3 684 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 TTC39CQ8N584 583 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 LRRC52Q8N7C0 313 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 TATDN2Q93075 761 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 FAM84AQ96KN4 292 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 ZNF560Q96MR9 790 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 CHP1Q99653 195 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 RSAD1Q9HA92 442 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 LUC7LQ9NQ29 371 aaKnown RBP15.42■□□□□ 0.06
SHMT2-208ENST00000553868 KLK14Q9P0G3 267 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 SIX4Q9UIU6 781 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 AJAP1Q9UKB5 411 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms