RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CDK7P50613 346 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 VAMP7P51809 220 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 YARSP54577 528 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 MRPS6P82932 125 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 ZNF200P98182 395 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 PRKCQQ04759 706 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 MBTD1Q05BQ5 628 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 MCL1Q07820 350 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 BFSP1Q12934 665 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 DRP2Q13474 957 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 IFI16Q16666 785 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 KIZQ2M2Z5 673 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 DCAF4L1Q3SXM0 396 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 HS1BP3Q53T59 392 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 HSP90AA4PQ58FG1 418 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 NOTUMQ6P988 496 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 MPZL3Q6UWV2 235 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 SLC39A5Q6ZMH5 540 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 GBP6Q6ZN66 633 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 LRRC55Q6ZSA7 311 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 SERINC5Q86VE9 423 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 NT5DC4Q86YG4 428 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 IRF2BP1Q8IU81 584 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 KSR1Q8IVT5 923 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 TRIM59Q8IWR1 403 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 HACE1Q8IYU2 909 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 TOP6BLQ8N6T0 577 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC150Q8NCX0 1101 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 LRRN4CLQ8ND94 238 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 NEK11Q8NG66 645 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 CAGE1Q8TC20 777 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 U2AF1L4Q8WU68 220 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 CACTINQ8WUQ7 758 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 ARMC5Q96C12 935 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC51Q96ER9 411 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 ZNF333Q96JL9 665 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 TOX2Q96NM4 488 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 NAP1L5Q96NT1 182 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 NECAB3Q96P71 396 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 PPP1R9BQ96SB3 815 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 MSTO1Q9BUK6 570 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC94Q9BW85 323 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 TARS2Q9BW92 718 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 FGFBP2Q9BYJ0 223 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 EDEM3Q9BZQ6 932 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 SENP6Q9GZR1 1112 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC113Q9H0I3 377 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 HSD3B7Q9H2F3 369 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 ADAMTS10Q9H324 1103 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 C12orf49Q9H741 205 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 RPF1Q9H9Y2 349 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 GINS2Q9Y248 185 aa5.42□□□□□ -1.54
VTI1B-202ENST00000553619 R3HCC1Q9Y3T6 440 aaKnown RBP5.42□□□□□ -1.54
VTI1B-202ENST00000553619 UTRNP46939 3433 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 A0A0B4J269 797 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 LGALS16A8MUM7 142 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 FBXO24O75426 580 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 AKAP3O75969 853 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 CLTAP09496 248 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC172P0C7W6 258 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 TNNI1P19237 187 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ITIH2P19823 946 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ADSSP30520 456 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 THPOP40225 353 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 GJA8P48165 433 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 CASP4P49662 377 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 NOLC1Q14978 699 aaKnown RBP eCLIP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 SNX17Q15036 470 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 SNRNP35Q16560 246 aaKnown RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ZNF568Q3ZCX4 644 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ZC3H12AQ5D1E8 599 aaKnown RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 SPECC1LQ69YQ0 1117 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 KRT39Q6A163 491 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 SLC27A1Q6PCB7 646 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 RUFY4Q6ZNE9 571 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 TMC6Q7Z403 805 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ATG4DQ86TL0 474 aaPredicted RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 VSTM4Q8IW00 320 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 PARD3BQ8TEW8 1205 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 FAM168AQ92567 244 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ANKRD36BP1Q96IX9 119 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 PDLIM2Q96JY6 352 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 HRASLS5Q96KN8 279 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ACAP3Q96P50 834 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ERGIC2Q96RQ1 377 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 CBWD1Q9BRT8 395 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 KIFC3Q9BVG8 833 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 TRIM6Q9C030 488 aaPredicted RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ASB7Q9H672 318 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 MMRN2Q9H8L6 949 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 PLEKHA5Q9HAU0 1116 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 UBN1Q9NPG3 1134 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 TOPORSQ9NS56 1045 aaPredicted RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ZNHIT6Q9NWK9 470 aaKnown RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 TAB2Q9NYJ8 693 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ANKFY1Q9P2R3 1169 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
VTI1B-202ENST00000553619 CDY2AQ9Y6F7 541 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ITIH6Q6UXX5 1313 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms