RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 HINFPQ9BQA5 517 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 SLC46A2Q9BY10 475 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 LMAN1LQ9HAT1 526 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 DLL3Q9NYJ7 618 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 GTF3C4Q9UKN8 822 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 OBSL1O75147 1896 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 PTPRJQ12913 1337 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 CFAP47Q6ZTR5 3102 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 ACACBO00763 2458 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 KIF26AQ9ULI4 1882 aaPredicted RBP16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 ZNF638Q14966 1978 aaKnown RBP16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 MYBPHLA2RUH7 354 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 SPECC1L-ADORA2AF8WAN1 911 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 TGFB1I1O43294 461 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 F11P03951 625 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 CTHP32929 405 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 PUM1Q14671 1186 aaKnown RBP eCLIP16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 PSMD6Q15008 389 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 BMT2Q1RMZ1 405 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 DGKKQ5KSL6 1271 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 LIMS2Q7Z4I7 341 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 OSTM1Q86WC4 334 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 SCFD1Q8WVM8 642 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 FAM84AQ96KN4 292 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 SYT15Q9BQS2 421 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 CDH9Q9ULB4 789 aa16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 MAGED2Q9UNF1 606 aaPredicted RBP16.21■□□□□ 0.19
SDR39U1-205ENST00000553546 NOL4O94818 638 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 CHRNB1P11230 501 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 TNNI1P19237 187 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 CYP2F1P24903 491 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 MAGEA11P43364 429 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 CYP2J2P51589 502 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 CYP24A1Q07973 514 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 ITPRIPL2Q3MIP1 535 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 TMEM150AQ86TG1 271 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 NELFCDQ8IXH7 590 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 C12orf56Q8IXR9 622 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 MAB21L3Q8N8X9 362 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 SUMF1Q8NBK3 374 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 GOLGA5Q8TBA6 731 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 MYRFLQ96LU7 910 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 CEP295NLQ96MC4 621 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 LRRC3BQ96PB8 259 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 BLZF1Q9H2G9 400 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 TDP1Q9NUW8 608 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
SDR39U1-205ENST00000553546 CLIC2O15247 247 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 LILRB5O75023 590 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 FAM163BP0C2L3 166 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 SLFN14P0C7P3 912 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 WARSP23381 471 aaKnown RBP16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 AFMP43652 599 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 GPR15P49685 360 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 ZNF268Q14587 947 aaPredicted RBP16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 DDR2Q16832 855 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 KNOP1Q1ED39 458 aaKnown RBP16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 SCARA3Q6AZY7 606 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 FAM171BQ6P995 826 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 VSTM1Q6UX27 236 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 MON1AQ86VX9 555 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 SPEM1Q8N4L4 309 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 RDH13Q8NBN7 331 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 KBTBD7Q8WVZ9 684 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 SECISBP2LQ93073 1101 aaKnown RBP16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 EPC1Q9H2F5 836 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 SLC39A2Q9NP94 309 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 GTSE1Q9NYZ3 720 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 MAGEC2Q9UBF1 373 aaPredicted RBP16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 SPTBN2O15020 2390 aa16.19■□□□□ 0.18
SDR39U1-205ENST00000553546 CASP1P29466 404 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 CXCL12P48061 93 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 SOX9P48436 509 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 TNNC1P63316 161 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 CUL4BQ13620 913 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 PKP1Q13835 747 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 SDHAF4Q5VUM1 108 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 TXNDC8Q6A555 127 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 CC2D1AQ6P1N0 951 aaPredicted RBP16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 TSSK4Q6SA08 328 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 SCN4BQ8IWT1 228 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 SYNPOQ8N3V7 929 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 SMG9Q9H0W8 520 aaKnown RBP16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 EXOC1Q9NV70 894 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 EHD2Q9NZN4 543 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 NCDNQ9UBB6 729 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 USP25Q9UHP3 1055 aa16.18■□□□□ 0.18
SDR39U1-205ENST00000553546 MAP1BP46821 2468 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms