RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GCNT3O95395 438 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 CYP11A1P05108 521 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 TMEM191BP0C7N4 346 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 IDEP14735 1019 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 GAP43P17677 238 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 ATF6P18850 670 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 PDCP20941 246 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 DDX6P26196 483 aaKnown RBP eCLIP10.67□□□□□ -0.7
ACTN1-208ENST00000553370 DDIT3P35638 169 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 GTF2BQ00403 316 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 MYL7Q01449 175 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 TNK2Q07912 1038 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 SRSF5Q13243 272 aaKnown RBP10.67□□□□□ -0.7
ACTN1-208ENST00000553370 NFE2Q16621 373 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-208ENST00000553370 RRAGBQ5VZM2 374 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 WSCD1Q658N2 575 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 IL31Q6EBC2 164 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 SLC39A4Q6P5W5 647 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 MAB21L3Q8N8X9 362 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 SAAL1Q96ER3 474 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 ACCSQ96QU6 501 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 PI4K2AQ9BTU6 479 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 LRRC3Q9BY71 257 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 KIF9Q9HAQ2 790 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 PARD6AQ9NPB6 346 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 BLOC1S4Q9NUP1 217 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 UXTQ9UBK9 157 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-208ENST00000553370 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 ABCA7Q8IZY2 2146 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 SHISA7A6NL88 538 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CKMP06732 381 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CSH1P0DML2 217 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CSH2P0DML3 217 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 HAPLN1P10915 354 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-208ENST00000553370 TDGF1P13385 188 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 POLR2BP30876 1174 aaKnown RBP10.66□□□□□ -0.7
ACTN1-208ENST00000553370 STAT6P42226 847 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 IFNAR2P48551 515 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 RPL10AP62906 217 aaKnown RBP10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CEBPZQ03701 1054 aaKnown RBP10.66□□□□□ -0.7
ACTN1-208ENST00000553370 DMWDQ09019 674 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 PSMD2Q13200 908 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 PPM1JQ5JR12 505 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 TXNDC11Q6PKC3 985 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 PRR23CQ6ZRP0 262 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 NT5DC4Q86YG4 428 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 SPATA2LQ8IUW3 424 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-208ENST00000553370 SCN4BQ8IWT1 228 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CMTM8Q8IZV2 173 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 ZNF687Q8N1G0 1237 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 SYNPOQ8N3V7 929 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CPA6Q8N4T0 437 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 CHAMP1Q96JM3 812 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 EBF3Q9H4W6 596 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 GKN1Q9NS71 199 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 SEMA4GQ9NTN9 838 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 RBAKQ9NYW8 714 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-208ENST00000553370 SEL1LQ9UBV2 794 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 AGAP1Q9UPQ3 857 aa10.66□□□□□ -0.7
ACTN1-208ENST00000553370 TRAV19A0A0A6YYK7 116 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 ANO9A1A5B4 782 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 RPP40O75818 363 aaKnown RBP10.65□□□□□ -0.7
ACTN1-208ENST00000553370 LDHAP00338 332 aaKnown RBP10.65□□□□□ -0.7
ACTN1-208ENST00000553370 ITGB3P05106 788 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 PXNP49023 591 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-208ENST00000553370 GRIN1Q05586 938 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 MYO1EQ12965 1108 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 RUNX3Q13761 415 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 GAS6Q14393 721 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 KCNB1Q14721 858 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 CSRP2Q16527 193 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
ACTN1-208ENST00000553370 TRIM68Q6AZZ1 485 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 STXBP4Q6ZWJ1 553 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 EFCAB13Q8IY85 973 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-208ENST00000553370 FSIP1Q8NA03 581 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 STKLD1Q8NE28 680 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 ANKRD36BP1Q96IX9 119 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 EPSTI1Q96J88 318 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 TDP1Q9NUW8 608 aa10.65□□□□□ -0.7
ACTN1-208ENST00000553370 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
ACTN1-208ENST00000553370 GOLGA8IPA6NC78 632 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 GOLGA8JA6NMD2 632 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 SLC30A4O14863 429 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 AXIN1O15169 862 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 HRO43593 1189 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 PAPSS2O95340 614 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
ACTN1-208ENST00000553370 TNNC2P02585 160 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ADRB2P07550 413 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ACAT1P24752 427 aaKnown RBP10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ANXA13P27216 316 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 PCSK1P29120 753 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 WEE1P30291 646 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 GPR15P49685 360 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 NLRP12P59046 1061 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ALCAMQ13740 583 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms