RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RSPRY1Q96DX4 576 aa13.86□□□□□ -0.19
ACTN1-207ENST00000553290 SNX25Q9H3E2 840 aa13.86□□□□□ -0.19
ACTN1-207ENST00000553290 GDPD2Q9HCC8 539 aa13.86□□□□□ -0.19
ACTN1-207ENST00000553290 MAGEC2Q9UBF1 373 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-207ENST00000553290 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
ACTN1-207ENST00000553290 GOLGA6L4A6NEF3 574 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 HCRTO43612 131 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 ATP2C2O75185 946 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 LRRN2O75325 713 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 NOL4O94818 638 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 F11P03951 625 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 PDGFRBP09619 1106 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 RPS9P46781 194 aaKnown RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 CASP4P49662 377 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 GPR15P49685 360 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MYL6P60660 151 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 PSMC1P62191 440 aaKnown RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 BIRC3Q13489 604 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 DDR2Q16832 855 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 ARHGAP29Q52LW3 1261 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 VSTM1Q6UX27 236 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 CMTM8Q8IZV2 173 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 OR6B3Q8NGW1 331 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MYCBPAPQ8TBZ2 947 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 PLEKHO2Q8TD55 490 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 CSGALNACT1Q8TDX6 532 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MRPS31Q92665 395 aaKnown RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 TRMT2BQ96GJ1 504 aaKnown RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MSANTD3Q96H12 275 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MYRFLQ96LU7 910 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 CEP295NLQ96MC4 621 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 SLC46A2Q9BY10 475 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 XYLT2Q9H1B5 865 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 VRTNQ9H8Y1 702 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 CRTAC1Q9NQ79 661 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MAGED2Q9UNF1 606 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 FRMD4BQ9Y2L6 1034 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 MTF2Q9Y483 593 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-207ENST00000553290 TICRRQ7Z2Z1 1910 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 NCANO14594 1321 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 VPS13AQ96RL7 3174 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 COL4A3Q01955 1670 aa13.85□□□□□ -0.19
ACTN1-207ENST00000553290 COL4A2P08572 1712 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 ARNTLO00327 626 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 MAPK13O15264 365 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 C4BPAP04003 597 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 TARSP26639 723 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 AVPR1AP37288 418 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 NFIL3Q16649 462 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 CCDC142Q17RM4 750 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 SDHAF4Q5VUM1 108 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 C1orf228Q6PIY5 440 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 TMEM150AQ86TG1 271 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 GUF1Q8N442 669 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 MAB21L3Q8N8X9 362 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 BPIFB1Q8TDL5 484 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 MYLPFQ96A32 169 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 CLDN23Q96B33 292 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 SPATA17Q96L03 361 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 C8orf33Q9H7E9 229 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 THG1LQ9NWX6 298 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 NXF1Q9UBU9 619 aaKnown RBP13.84□□□□□ -0.19
ACTN1-207ENST00000553290 PIAS3Q9Y6X2 628 aa13.84□□□□□ -0.19
ACTN1-207ENST00000553290 ZNF638Q14966 1978 aaKnown RBP13.83□□□□□ -0.19
ACTN1-207ENST00000553290 USP34Q70CQ2 3546 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 OBSL1O75147 1896 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 SHISA7A6NL88 538 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 IKBKBO14920 756 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 GFRA3O60609 400 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 PRAMEF12O95522 483 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 BDNFP23560 247 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 RPL13P26373 211 aaKnown RBP13.83□□□□□ -0.2
ACTN1-207ENST00000553290 ANXA13P27216 316 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 GRIK1P39086 918 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 CYP27A1Q02318 531 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 NCOA4Q13772 614 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 SGSM1Q2NKQ1 1148 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 FRMD5Q7Z6J6 570 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 MON1AQ86VX9 555 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 STKLD1Q8NE28 680 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 FAM3CQ92520 227 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 PCED1BQ96HM7 432 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 LRRC3BQ96PB8 259 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 KIF9Q9HAQ2 790 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 SPATA6Q9NWH7 488 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-207ENST00000553290 F5P12259 2224 aa13.83□□□□□ -0.2
ACTN1-207ENST00000553290 PTPRDP23468 1912 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 CACNA1IQ9P0X4 2223 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms