RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 C3orf20Q8ND61 904 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 C3orf58Q8NDZ4 430 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 DIS3LQ8TF46 1054 aaKnown RBP11.93□□□□□ -0.5
CACNB3-224ENST00000552812 COG1Q8WTW3 980 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 PBKQ96KB5 322 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 C11orf49Q9H6J7 331 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 HESX1Q9UBX0 185 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 ANAPC7Q9UJX3 599 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-224ENST00000552812 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 MYO1FO00160 1098 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 HOXA2O43364 376 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 B3GAT3O94766 335 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 ODC1P11926 461 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 IBSPP21815 317 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-224ENST00000552812 SLC1A1P43005 524 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 GABRB2P47870 512 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 ITIH3Q06033 890 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 PDCLQ13371 301 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 MESDQ14696 234 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 GOLGA7BQ2TAP0 167 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 PTPN20Q4JDL3 420 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 C2CD6Q53TS8 623 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 PPP1R26Q5T8A7 1209 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-224ENST00000552812 WSCD1Q658N2 575 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 DSTYKQ6XUX3 929 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 C12orf29Q8N999 325 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 IPO4Q8TEX9 1081 aaKnown RBP11.92□□□□□ -0.5
CACNB3-224ENST00000552812 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 CHORDC1Q9UHD1 332 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-224ENST00000552812 DSEQ9UL01 958 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
CACNB3-224ENST00000552812 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 M0QZQ0 153 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 ZNF185O15231 689 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CYP11A1P05108 521 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CLTBP09497 229 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 HSPA1AP0DMV8 641 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 HSPA1BP0DMV9 641 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 COMTP21964 271 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 LMO2P25791 158 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CXCR5P32302 372 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 MAN1A1P33908 653 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 RFC2P35250 354 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PAFAH1B1P43034 410 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 BCAT1P54687 386 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 SNX16P57768 344 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 ZNF268Q14587 947 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CFAP221Q4G0U5 840 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 TIGD5Q53EQ6 642 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CCDC181Q5TID7 509 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 DNAJC24Q6P3W2 148 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 OSTM1Q86WC4 334 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 ABI1Q8IZP0 508 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 B3GALNT2Q8NCR0 500 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 LRRN4CLQ8ND94 238 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 UBXN4Q92575 508 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 WNT2BQ93097 391 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 SCLYQ96I15 445 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CAPZA3Q96KX2 299 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CPXM1Q96SM3 734 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PSMB7Q99436 277 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CARD9Q9H257 536 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 FAM49BQ9NUQ9 324 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 TBC1D13Q9NVG8 400 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CYTH4Q9UIA0 394 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 KCNK3O14649 394 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PFKMP08237 780 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PDGFRBP09619 1106 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PCSK1P29120 753 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CCL23P55773 120 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PPP1R15BQ5SWA1 713 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 TTC30AQ86WT1 665 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 UBL4BQ8N7F7 174 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 ANKRD52Q8NB46 1076 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 SLC35F5Q8WV83 523 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CD101Q93033 1021 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 PAWRQ96IZ0 340 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 HNRNPABQ99729 332 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 TMEM39AQ9NV64 488 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms