RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 PFKMP08237 780 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 CKBP12277 381 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 ITGA4P13612 1032 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 AKAP5P24588 427 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 CXCR5P32302 372 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 NDST1P52848 882 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 RWDD2BP57060 319 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 SNX16P57768 344 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 COPS2P61201 443 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 SOX4Q06945 474 aaPredicted RBP10.39□□□□□ -0.75
TMEM116-216ENST00000552800 TAZQ16635 292 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 SV2CQ496J9 727 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 SGO2Q562F6 1265 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 TWF2Q6IBS0 349 aaKnown RBP10.39□□□□□ -0.75
TMEM116-216ENST00000552800 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 POLNQ7Z5Q5 900 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 ERICH1Q86X53 443 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 VSIG1Q86XK7 387 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 CRIPAKQ8N1N5 446 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 C12orf50Q8NA57 414 aaPredicted RBP10.39□□□□□ -0.75
TMEM116-216ENST00000552800 ANKRD52Q8NB46 1076 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 C1orf131Q8NDD1 294 aaKnown RBP10.39□□□□□ -0.75
TMEM116-216ENST00000552800 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.39□□□□□ -0.75
TMEM116-216ENST00000552800 HSFY1Q96LI6 401 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 UROC1Q96N76 676 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 RUNDC3BQ96NL0 473 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 PPP1R16BQ96T49 567 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 PLVAPQ9BX97 442 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
TMEM116-216ENST00000552800 PCYOX1Q9UHG3 505 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 CYTH4Q9UIA0 394 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 PTPN22Q9Y2R2 807 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 HES2Q9Y543 173 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 NME7Q9Y5B8 376 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 A0A1W2PQ45 241 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 A0A1W2PQY0 241 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 C9IYK1 514 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 TMEM189-UBE2V1I3L0A0 370 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 SPTLC1O15269 473 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 MICAL2O94851 1124 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 NDUFV2P19404 249 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 BRD2P25440 801 aaKnown RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 THPOP40225 353 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 GUCA2AQ02747 115 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 MESDQ14696 234 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 UPP1Q16831 310 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 PTPN20Q4JDL3 420 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 TEX35Q5T0J7 233 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 CCDC181Q5TID7 509 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 DENND1BQ6P3S1 775 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 SLC24A5Q71RS6 500 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 RTN4RL1Q86UN2 441 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 XYLT1Q86Y38 959 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 EXD1Q8NHP7 514 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 MAIP1Q8WWC4 291 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 C18orf25Q96B23 403 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 MS4A14Q96JA4 679 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 RNPC3Q96LT9 517 aaKnown RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 TOX2Q96NM4 488 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 PNKPQ96T60 521 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 HNRNPABQ99729 332 aaKnown RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 PDCL3Q9H2J4 239 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 LRRC19Q9H756 370 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 VIPAS39Q9H9C1 493 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 HOMER3Q9NSC5 361 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 RBM12Q9NTZ6 932 aaKnown RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 MIOSQ9NXC5 875 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 TUBGCP4Q9UGJ1 667 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 ANAPC7Q9UJX3 599 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 PACSIN2Q9UNF0 486 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-216ENST00000552800 GINS2Q9Y248 185 aa10.38□□□□□ -0.75
TMEM116-216ENST00000552800 ARL5CA6NH57 179 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 M0QZQ0 153 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 PPEF2O14830 753 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 SART1O43290 800 aaKnown RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ERLIN1O75477 346 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ENDOD1O94919 500 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 CALCAP01258 141 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ERBB2P04626 1255 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 PYGMP11217 842 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 CD58P19256 250 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 PCK1P35558 622 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 GNL1P36915 607 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 LHX1P48742 406 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 GUCY2FP51841 1108 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 PLCB3Q01970 1234 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 KLF1Q13351 362 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 GPNMBQ14956 572 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 SIX1Q15475 284 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ZNF618Q5T7W0 954 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 DRICH1Q6PGQ1 229 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 CD300LGQ6UXG3 332 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 MMS22LQ6ZRQ5 1243 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ANKRD33Q7Z3H0 272 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 MAATS1Q7Z4T9 603 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ECHDC2Q86YB7 292 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms