RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ATG14Q6ZNE5 492 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 NIPA1Q7RTP0 329 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 USP33Q8TEY7 942 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 CDC6Q99741 560 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 SPZ1Q9BXG8 430 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 ANO3Q9BYT9 981 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 KRT23Q9C075 422 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 CSRNP2Q9H175 543 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 CXCL16Q9H2A7 254 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 TBC1D22BQ9NU19 505 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 ZBTB40Q9NUA8 1239 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 TPCN1Q9ULQ1 816 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 MAN2B2Q9Y2E5 1009 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 MYLKQ15746 1914 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 SPG11Q96JI7 2443 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 IGLV3-22A0A075B6J6 115 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 WDR64B1ANS9 1081 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 TSPAN1O60635 241 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 ERLIN2O94905 339 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 AFPP02771 609 aaKnown RBP9.15□□□□□ -0.94
PRIM1-208ENST00000552590 JUPP14923 745 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 GJA4P35212 333 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 AMPD2Q01433 879 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 NMIQ13287 307 aaPredicted RBP9.15□□□□□ -0.94
PRIM1-208ENST00000552590 LCE1DQ5T752 114 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 NOTUMQ6P988 496 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 GAREM2Q75VX8 874 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 TMPRSS12Q86WS5 348 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 CDR2LQ86X02 465 aaPredicted RBP9.15□□□□□ -0.94
PRIM1-208ENST00000552590 HACE1Q8IYU2 909 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 GOLGA6L1Q8N7Z2 621 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 TBC1D32Q96NH3 1257 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 LGMNQ99538 433 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 LPIN3Q9BQK8 851 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 BCCIPQ9P287 314 aaKnown RBP eCLIP9.15□□□□□ -0.94
PRIM1-208ENST00000552590 MMP17Q9ULZ9 603 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 TBX20Q9UMR3 447 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 BTBD3Q9Y2F9 522 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 RP1L1Q8IWN7 2480 aaPredicted RBP9.15□□□□□ -0.94
PRIM1-208ENST00000552590 ARID2Q68CP9 1835 aa9.15□□□□□ -0.94
PRIM1-208ENST00000552590 A0A1W2PQD8 194 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 BRINP1O60477 761 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 B3GAT3O94766 335 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 RFC5P40937 340 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 RTP5Q14D33 572 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 ERICH1Q86X53 443 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 SLC41A1Q8IVJ1 513 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 HMGB4Q8WW32 186 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 PRPF31Q8WWY3 499 aaKnown RBP9.15□□□□□ -0.95
PRIM1-208ENST00000552590 CD101Q93033 1021 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 CCDC51Q96ER9 411 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 NIFKQ9BYG3 293 aaKnown RBP9.15□□□□□ -0.95
PRIM1-208ENST00000552590 NUCKS1Q9H1E3 243 aaKnown RBP9.15□□□□□ -0.95
PRIM1-208ENST00000552590 ATXN3LQ9H3M9 355 aa9.15□□□□□ -0.95
PRIM1-208ENST00000552590 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.15□□□□□ -0.95
PRIM1-208ENST00000552590 ZNF638Q14966 1978 aaKnown RBP9.14□□□□□ -0.95
PRIM1-208ENST00000552590 PDZD2O15018 2839 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 PTGESO14684 152 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 CHMP2AO43633 222 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 STBD1O95210 358 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 PLEKHA8P1O95397 391 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 NPTXRO95502 500 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 SREBF1P36956 1147 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 BRCC3P46736 316 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 BYSLQ13895 437 aaKnown RBP9.14□□□□□ -0.95
PRIM1-208ENST00000552590 NAB2Q15742 525 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 KIAA1614Q5VZ46 1190 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 CD300LGQ6UXG3 332 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 RGL4Q8IZJ4 473 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 PGBD3Q8N328 593 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 TRIML1Q8N9V2 468 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.14□□□□□ -0.95
PRIM1-208ENST00000552590 HSPA12BQ96MM6 686 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 CNNM2Q9H8M5 875 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 TM7SF3Q9NS93 570 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 SEPT3Q9UH03 358 aa9.14□□□□□ -0.95
PRIM1-208ENST00000552590 FNDC3AQ9Y2H6 1198 aaKnown RBP9.14□□□□□ -0.95
PRIM1-208ENST00000552590 BLACEA4D250 179 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 K7EQS6 105 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 IFIT3O14879 490 aaKnown RBP9.13□□□□□ -0.95
PRIM1-208ENST00000552590 TNFSF14O43557 240 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 CILPO75339 1184 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 THP07101 528 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 AXLP30530 894 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 GPC1P35052 558 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 SCRN1Q12765 414 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 TARDBPQ13148 414 aaKnown RBP eCLIP9.13□□□□□ -0.95
PRIM1-208ENST00000552590 SART3Q15020 963 aaKnown RBP9.13□□□□□ -0.95
PRIM1-208ENST00000552590 XKR3Q5GH77 459 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 BROXQ5VW32 411 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 TPGS2Q68CL5 300 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 HEATR3Q7Z4Q2 680 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 SRBD1Q8N5C6 995 aaKnown RBP9.13□□□□□ -0.95
PRIM1-208ENST00000552590 RNF149Q8NC42 400 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 SLC7A3Q8WY07 619 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 ZNF592Q92610 1267 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 EXOC4Q96A65 974 aa9.13□□□□□ -0.95
PRIM1-208ENST00000552590 TMEM143Q96AN5 459 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms