RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 CSRP2Q16527 193 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 NFE2Q16621 373 aaPredicted RBP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 TMEM132AQ24JP5 1023 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 TMEM196Q5HYL7 178 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 PLA2G2CQ5R387 149 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 OVOS1Q6IE37 1185 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 TXNDC11Q6PKC3 985 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 WDR5BQ86VZ2 330 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 ARID3BQ8IVW6 561 aaPredicted RBP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 CAMKK1Q8N5S9 505 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 OR10T2Q8NGX3 314 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 BPIFB1Q8TDL5 484 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 ING5Q8WYH8 240 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 LARP4BQ92615 738 aaKnown RBP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 ZNF516Q92618 1163 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 RAD54LQ92698 747 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 DNAJC19Q96DA6 116 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 FUBP3Q96I24 572 aaKnown RBP eCLIP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 SENP8Q96LD8 212 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 HNRNPABQ99729 332 aaKnown RBP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 ACBD6Q9BR61 282 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 TMEM206Q9H813 350 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 RPF1Q9H9Y2 349 aaKnown RBP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 POLD4Q9HCU8 107 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 PARD6AQ9NPB6 346 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 SEMA4GQ9NTN9 838 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 ZDHHC9Q9Y397 364 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 PCDHGA5Q9Y5G8 931 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 SRPRBQ9Y5M8 271 aaKnown RBP4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
TMEM106C-220ENST00000552561 KALRNO60229 2985 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 PTPRDP23468 1912 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ANAPC1Q9H1A4 1944 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 CFAP46Q8IYW2 2715 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 A0A0A0MRY4 1105 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 A0A1W2PRU2 124 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 KPNA7A9QM74 516 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 PPEF2O14830 753 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ARHGAP6O43182 974 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ATG13O75143 517 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 TADA3O75528 432 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 NOL4O94818 638 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 PRAMEF12O95522 483 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 OLFM2O95897 454 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 LDHAP00338 332 aaKnown RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 CSH1P0DML2 217 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 CSH2P0DML3 217 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 GAP43P17677 238 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 PLCG1P19174 1290 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 CD72P21854 359 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 GJB2P29033 226 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 UBA7P41226 1012 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 VIPR2P41587 438 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 MAGEA11P43364 429 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ALDH1A3P47895 512 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 LIG4P49917 911 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 NOVA1P51513 510 aaKnown RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 MCCD1P59942 119 aaPredicted RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 EHHADHQ08426 723 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 GNL2Q13823 731 aaKnown RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 TMEM132DQ14C87 1099 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 FBXO43Q4G163 708 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 SOWAHCQ53LP3 525 aaPredicted RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 JADE1Q6IE81 842 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 PSAPL1Q6NUJ1 521 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 FAM171BQ6P995 826 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 NUDT18Q6ZVK8 323 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ZNF605Q86T29 641 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 LRRTM3Q86VH5 581 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 MON1AQ86VX9 555 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 BRSK2Q8IWQ3 736 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 EFCAB13Q8IY85 973 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 CMTM8Q8IZV2 173 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 TMEM86AQ8N2M4 240 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 TOP6BLQ8N6T0 577 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 C1orf127Q8N9H9 656 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ATAD1Q8NBU5 361 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 CALML4Q96GE6 196 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 INTS4Q96HW7 963 aaKnown RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 MSTO1Q9BUK6 570 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 TTLL2Q9BWV7 592 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 SLC46A2Q9BY10 475 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 LMAN1LQ9HAT1 526 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 HPS4Q9NQG7 708 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 EBF1Q9UH73 591 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 FBXO2Q9UK22 296 aaPredicted RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 KIAA1549LQ6ZVL6 1849 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 C2CD3Q4AC94 2353 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 DMXL2Q8TDJ6 3036 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 PLXND1Q9Y4D7 1925 aa4.78□□□□□ -1.64
TMEM106C-220ENST00000552561 SDK1Q7Z5N4 2213 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 LOC400499M0QZD8 3231 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 CACNA1EQ15878 2313 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 EML5Q05BV3 1969 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 FAM92AA1XBS5 289 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ANKRD63C9JTQ0 380 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 K7ENM7 598 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms