RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 KBTBD7Q8WVZ9 684 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 TAF4BQ92750 862 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 SECISBP2LQ93073 1101 aaKnown RBP9.8□□□□□ -0.84
CDK4-211ENST00000552254 MMS19Q96T76 1030 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 ACBD6Q9BR61 282 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 ZCWPW1Q9H0M4 648 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 KCNK12Q9HB15 430 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 ZDHHC7Q9NXF8 308 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 DDX43Q9NXZ2 648 aaKnown RBP9.8□□□□□ -0.84
CDK4-211ENST00000552254 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
CDK4-211ENST00000552254 AFF4Q9UHB7 1163 aaKnown RBP9.8□□□□□ -0.84
CDK4-211ENST00000552254 MAFFQ9ULX9 164 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 POLIQ9UNA4 740 aa9.8□□□□□ -0.84
CDK4-211ENST00000552254 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
CDK4-211ENST00000552254 MTMR11A4FU01 709 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 CCL16O15467 120 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 HCRTO43612 131 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 LRRN2O75325 713 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 TACC1O75410 805 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 HNRNPA1P09651 372 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDK4-211ENST00000552254 PTMSP20962 102 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 WARSP23381 471 aaKnown RBP9.79□□□□□ -0.84
CDK4-211ENST00000552254 ACAT1P24752 427 aaKnown RBP9.79□□□□□ -0.84
CDK4-211ENST00000552254 LMO2P25791 158 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 HOXA9P31269 272 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 ELF1P32519 619 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 MXI1P50539 228 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 MYL7Q01449 175 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 DMWDQ09019 674 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 KLHL40Q2TBA0 621 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 CBWD6Q4V339 395 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 SLC39A12Q504Y0 691 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 CBWD3Q5JTY5 395 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 CBWD5Q5RIA9 395 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 SPOPLQ6IQ16 392 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 CAVIN1Q6NZI2 390 aaKnown RBP9.79□□□□□ -0.84
CDK4-211ENST00000552254 CYP26C1Q6V0L0 522 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 IRF2BP1Q8IU81 584 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 TRIM59Q8IWR1 403 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 DCP1BQ8IZD4 617 aaKnown RBP9.79□□□□□ -0.84
CDK4-211ENST00000552254 FBXL13Q8NEE6 735 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 SEMA4DQ92854 862 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 PGLYRP2Q96PD5 576 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 MRPL45Q9BRJ2 306 aaKnown RBP9.79□□□□□ -0.84
CDK4-211ENST00000552254 PI4K2AQ9BTU6 479 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 RHOBTB2Q9BYZ6 727 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 CYP4F11Q9HBI6 524 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 COQ4Q9Y3A0 265 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 NME7Q9Y5B8 376 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 OBSL1O75147 1896 aa9.79□□□□□ -0.84
CDK4-211ENST00000552254 COL4A3Q01955 1670 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 SOBPA7XYQ1 873 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 PRRG1O14668 218 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 ATP2C2O75185 946 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CLSTN1O94985 981 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CFHP08603 1231 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 POU2F2P09086 479 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CCDC192P0DO97 292 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 PCSK1P29120 753 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 GNL1P36915 607 aaPredicted RBP9.78□□□□□ -0.84
CDK4-211ENST00000552254 RAP1GAPP47736 663 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 FMO5P49326 533 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CDR1P51861 262 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CDH8P55286 799 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 TSPY1Q01534 308 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 SMARCB1Q12824 385 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 DUSP4Q13115 394 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 TDGQ13569 410 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 STX1AQ16623 288 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 TPD52L1Q16890 204 aaPredicted RBP9.78□□□□□ -0.84
CDK4-211ENST00000552254 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
CDK4-211ENST00000552254 ATAD1Q8NBU5 361 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 OR6B3Q8NGW1 331 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CNOT6LQ96LI5 555 aaKnown RBP9.78□□□□□ -0.84
CDK4-211ENST00000552254 PKMYT1Q99640 499 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 RPP25Q9BUL9 199 aaKnown RBP9.78□□□□□ -0.84
CDK4-211ENST00000552254 IMPG2Q9BZV3 1241 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 SDCBP2Q9H190 292 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CRISPLD1Q9H336 500 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 SNX25Q9H3E2 840 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 THAP9Q9H5L6 903 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 SMYD3Q9H7B4 428 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 APOBEC3GQ9HC16 384 aaKnown RBP9.78□□□□□ -0.84
CDK4-211ENST00000552254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDK4-211ENST00000552254 TMLHEQ9NVH6 421 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 ANO10Q9NW15 660 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 HCFC1R1Q9NWW0 138 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 RAB20Q9NX57 234 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 HSFX1Q9UBD0 423 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 GTF3C4Q9UKN8 822 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 USP18Q9UMW8 372 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 INSL5Q9Y5Q6 135 aa9.78□□□□□ -0.84
CDK4-211ENST00000552254 MYBPHLA2RUH7 354 aa9.77□□□□□ -0.85
CDK4-211ENST00000552254 PMM2O15305 246 aa9.77□□□□□ -0.85
CDK4-211ENST00000552254 LRG1P02750 347 aa9.77□□□□□ -0.85
CDK4-211ENST00000552254 PDGFRBP09619 1106 aa9.77□□□□□ -0.85
CDK4-211ENST00000552254 LAMP2P13473 410 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms