RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 NECTIN4Q96NY8 510 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 TWNKQ96RR1 684 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 LPIN3Q9BQK8 851 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 ELOVL4Q9GZR5 314 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 APEX2Q9UBZ4 518 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 CDH22Q9UJ99 828 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 C5orf42Q9H799 3197 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 GOLGA6L19H0YKK7 550 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 SOAT2O75908 522 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 CYP2F1P24903 491 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 EPHB3P54753 998 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 SMAD2Q15796 467 aaKnown RBP19.86■□□□□ 0.77
DDX54-209ENST00000551912 ZNF394Q53GI3 561 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 ENOSF1Q7L5Y1 443 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 APTXQ7Z2E3 356 aaKnown RBP19.86■□□□□ 0.77
DDX54-209ENST00000551912 KAT5Q92993 513 aa19.86■□□□□ 0.77
DDX54-209ENST00000551912 UBE2TQ9NPD8 197 aaPredicted RBP19.86■□□□□ 0.77
DDX54-209ENST00000551912 LGALS16A8MUM7 142 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 IL9P15248 144 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 BDNFP23560 247 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 MAGEA11P43364 429 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 ZNF445P59923 1031 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 VSTM1Q6UX27 236 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 GRASPQ7Z6J2 395 aaPredicted RBP19.85■□□□□ 0.77
DDX54-209ENST00000551912 UBR7Q8N806 425 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 JAKMIP2Q96AA8 810 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 TMEM176AQ96HP8 235 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 ZNF512Q96ME7 567 aaPredicted RBP19.85■□□□□ 0.77
DDX54-209ENST00000551912 KREMEN1Q96MU8 473 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 MED10Q9BTT4 135 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 B3GNT5Q9BYG0 378 aa19.85■□□□□ 0.77
DDX54-209ENST00000551912 ATP8B3O60423 1300 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 PTPN2P17706 415 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 ATF6P18850 670 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 ACO1P21399 889 aaKnown RBP19.84■□□□□ 0.77
DDX54-209ENST00000551912 RAD23BP54727 409 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 MFAP3P55082 362 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 RPL10AP62906 217 aaKnown RBP19.84■□□□□ 0.77
DDX54-209ENST00000551912 APBA1Q02410 837 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 KCNMA1Q12791 1236 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 VEPH1Q14D04 833 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 IQCEQ6IPM2 695 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 GJB7Q6PEY0 223 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 C12orf29Q8N999 325 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 SLC4A11Q8NBS3 891 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 HEXIM2Q96MH2 286 aaKnown RBP19.84■□□□□ 0.77
DDX54-209ENST00000551912 ZNF518BQ9C0D4 1074 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 POMKQ9H5K3 350 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 WDR6Q9NNW5 1121 aaKnown RBP19.84■□□□□ 0.77
DDX54-209ENST00000551912 SIX2Q9NPC8 291 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 FAM49BQ9NUQ9 324 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 CEP72Q9P209 647 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 ASB3Q9Y575 518 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 PCDHB4Q9Y5E5 795 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 C2orf16Q68DN1 1984 aa19.84■□□□□ 0.77
DDX54-209ENST00000551912 CLDN5O00501 218 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 BMP1P13497 986 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 CCDC130P13994 396 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 GRIK1P39086 918 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 UBXN1Q04323 297 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 FILIP1LQ4L180 1135 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 TJAP1Q5JTD0 557 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 TMEM270Q6UE05 265 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 ITIH5Q86UX2 942 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 FAM35AQ86V20 835 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 SCN4BQ8IWT1 228 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 FUKQ8N0W3 1084 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 SLC2A14Q8TDB8 520 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 LSM14BQ9BX40 385 aaKnown RBP19.83■□□□□ 0.77
DDX54-209ENST00000551912 HCFC1R1Q9NWW0 138 aa19.83■□□□□ 0.77
DDX54-209ENST00000551912 DNMT3BQ9UBC3 853 aaKnown RBP19.83■□□□□ 0.77
DDX54-209ENST00000551912 CLUHO75153 1309 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 TRIM66O15016 1216 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 GPR15P49685 360 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 DDR2Q16832 855 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 PABPC1LQ4VXU2 614 aaKnown RBP19.82■□□□□ 0.76
DDX54-209ENST00000551912 KLHDC7AQ5VTJ3 777 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 PAQR9Q6ZVX9 377 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 GIPC2Q8TF65 315 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 PSMG2Q969U7 264 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 CYFIP2Q96F07 1278 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 SMARCD1Q96GM5 515 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 HNRNPABQ99729 332 aaKnown RBP19.82■□□□□ 0.76
DDX54-209ENST00000551912 CORO1BQ9BR76 489 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 PHF7Q9BWX1 381 aaPredicted RBP19.82■□□□□ 0.76
DDX54-209ENST00000551912 DNAJC12Q9UKB3 198 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 PTPRDP23468 1912 aa19.82■□□□□ 0.76
DDX54-209ENST00000551912 SERPINC1P01008 464 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 RHOP08100 348 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 PAEPP09466 180 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 RFX1P22670 979 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 ANXA13P27216 316 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 NTHL1P78549 312 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 TAF12Q16514 161 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 ARHGAP44Q17R89 818 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 SDHAF4Q5VUM1 108 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 DPY19L2P1Q6NXN4 242 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 DNAJB7Q7Z6W7 309 aaPredicted RBP19.81■□□□□ 0.76
DDX54-209ENST00000551912 LEMD2Q8NC56 503 aa19.81■□□□□ 0.76
DDX54-209ENST00000551912 RBBP8NLQ8NC74 664 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms