RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 GBP2P32456 591 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-225ENST00000551845 ASPAP45381 313 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 RAP1GAPP47736 663 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CDR1P51861 262 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 NDST1P52848 882 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 TYRO3Q06418 890 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 VEPH1Q14D04 833 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CFAP221Q4G0U5 840 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
PTCH1-225ENST00000551845 SCARA5Q6ZMJ2 495 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 DNAJB7Q7Z6W7 309 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-225ENST00000551845 ITIH5Q86UX2 942 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 IRF2BP1Q8IU81 584 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CRYBG2Q8N1P7 616 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 LEMD2Q8NC56 503 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CORO1BQ9BR76 489 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 NT5C1AQ9BXI3 368 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 BCO2Q9BYV7 579 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 SDCBP2Q9H190 292 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 FAM124BQ9H5Z6 455 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CRTAC1Q9NQ79 661 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
PTCH1-225ENST00000551845 CEP72Q9P209 647 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 RHOP08100 348 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 CD58P19256 250 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 TBXAS1P24557 533 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 CYP2F1P24903 491 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 EEF1GP26641 437 aaKnown RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 GRIK1P39086 918 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 YWHAEP62258 255 aaKnown RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 NTHL1P78549 312 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 LRMPQ12912 555 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 MDH1BQ5I0G3 518 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 VSTM1Q6UX27 236 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 PDZD4Q76G19 769 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 ERMP1Q7Z2K6 904 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 FEZF2Q8TBJ5 459 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 PCED1BQ96HM7 432 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 DNAJC25Q9H1X3 360 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 ASAH2Q9NR71 780 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 HCFC1R1Q9NWW0 138 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-225ENST00000551845 PLXNA3P51805 1871 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 CLUHO75153 1309 aa11.31□□□□□ -0.6
PTCH1-225ENST00000551845 SMTNL1A8MU46 457 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 CILPO75339 1184 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 SOAT2O75908 522 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 MICAL2O94851 1124 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 FGF19O95750 216 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 TPM2P07951 284 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 MYL4P12829 197 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-225ENST00000551845 BDNFP23560 247 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 MAGEA11P43364 429 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 ID4P47928 161 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 INCA1Q0VD86 236 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 CUL2Q13617 745 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 DDR2Q16832 855 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 VWA3BQ502W6 1294 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 HSP90AA4PQ58FG1 418 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 GBP6Q6ZN66 633 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 C11orf57Q6ZUT1 292 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-225ENST00000551845 ZDHHC14Q8IZN3 488 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
PTCH1-225ENST00000551845 ANKRD20A12PQ8NF67 263 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 LMO3Q8TAP4 145 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 GIPC2Q8TF65 315 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 PSMG2Q969U7 264 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 CEP295NLQ96MC4 621 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
PTCH1-225ENST00000551845 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 NDST4Q9H3R1 872 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 DPEP3Q9H4B8 488 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 NME7Q9Y5B8 376 aa11.3□□□□□ -0.6
PTCH1-225ENST00000551845 SYCE3A1L190 88 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 PRR23AA6NEV1 266 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms