RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NRBP1Q9UHY1 535 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 EVLQ9UI08 416 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 WASF3Q9UPY6 502 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 DNM3Q9UQ16 869 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 TMX2Q9Y320 296 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 FPGT-TNNI3KV9GXZ4 949 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF536O15090 1300 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 UMODL1Q5DID0 1318 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 FRMPD2Q68DX3 1309 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 A0A0G2JMZ2 1700 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MAST2Q6P0Q8 1798 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF236Q9UL36 1845 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 GVINP1Q7Z2Y8 2422 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 FRYLO94915 3013 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 DMXL1Q9Y485 3027 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PRRC2BQ5JSZ5 2229 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 CACNA1FO60840 1977 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MGAMO43451 1857 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 LRRC10BA6NIK2 292 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 VWA5AO00534 786 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 N4BP3O15049 544 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PRKAB2O43741 272 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PEX14O75381 377 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MAFO75444 373 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 BCAR3O75815 825 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 FSBPO95073 299 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PGK1P00558 417 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TIMP1P01033 207 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 AKR1B1P15121 316 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 GSPT1P15170 499 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ZKSCAN1P17029 563 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ITGB5P18084 799 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MGAT5Q09328 741 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MALLQ13021 153 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ADAM9Q13443 819 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PICALMQ13492 652 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 GBX1Q14549 363 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 COG2Q14746 738 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ADRM1Q16186 407 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MAP9Q49MG5 647 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ATAT1Q5SQI0 421 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PHF19Q5T6S3 580 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 KANK2Q63ZY3 851 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TMEM200BQ69YZ2 307 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PPP4R3AQ6IN85 833 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MFSD5Q6N075 450 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TAPT1Q6NXT6 567 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TRMT10BQ6PF06 316 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 KLHDC10Q6PID8 442 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TMED8Q6PL24 325 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 CATIPQ7Z7H3 387 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 LYSMD2Q8IV50 215 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MAPKAPK5Q8IW41 473 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ZGPATQ8N5A5 531 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 CAMKK1Q8N5S9 505 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 FAM133AQ8N9E0 248 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 OR5AN1Q8NGI8 311 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 SMCR8Q8TEV9 937 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TSPEARQ8WU66 669 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 NRG4Q8WWG1 115 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ATXN2LQ8WWM7 1075 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 HPS3Q969F9 1004 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TTC17Q96AE7 1141 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 C1GALT1C1Q96EU7 318 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 DYDC2Q96IM9 177 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MAP3K14Q99558 947 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 SYT3Q9BQG1 590 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 GORASP1Q9BQQ3 440 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 GTPBP4Q9BZE4 634 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PRDM12Q9H4Q4 367 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 EPHX3Q9H6B9 360 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 RPAP3Q9H6T3 665 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ARNT2Q9HBZ2 717 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ANLNQ9NQW6 1124 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 KCND1Q9NSA2 647 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 FBXO28Q9NVF7 368 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 POLR3BQ9NW08 1133 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 AATFQ9NY61 560 aaKnown RBP eCLIP2.8□□□□□ -1.965e-19■■■■■ 27.9
CPSF6-207ENST00000551516 TMOD2Q9NZR1 351 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 SERPINB13Q9UIV8 391 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 MAGEL2Q9UJ55 1249 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 TUBD1Q9UJT1 453 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 INTUQ9ULD6 942 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 DDX49Q9Y6V7 483 aaKnown RBP2.8□□□□□ -1.96
CPSF6-207ENST00000551516 PMF1-BGLAPU3KQ54 211 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF292O60281 2723 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 EPG5Q9HCE0 2579 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF318Q5VUA4 2279 aa2.8□□□□□ -1.96
CPSF6-207ENST00000551516 DOCK1Q14185 1865 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ZFHX2Q9C0A1 2572 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 RIF1Q5UIP0 2472 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GPR179Q6PRD1 2367 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ELP1O95163 1332 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SALL3Q9BXA9 1300 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SYNRGQ9UMZ2 1314 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CYP2D7A0A087X1C5 515 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms