RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 RAPGEF4Q8WZA2 1011 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 ZDHHC12Q96GR4 267 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 IMPG2Q9BZV3 1241 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 PABPC3Q9H361 631 aaKnown RBP5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 CD320Q9NPF0 282 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 ATP11BQ9Y2G3 1177 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 CDY1Q9Y6F8 540 aa5.98□□□□□ -1.45
RAB3IP-213ENST00000550647 DRGXA6NNA5 263 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 E7ENX8 843 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 PCDH17O14917 1159 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 DHHO43323 396 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 TAL1P17542 331 aaPredicted RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 CR2P20023 1033 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 TNFAIP3P21580 790 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 PTDSS1P48651 473 aaKnown RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 PAPOLAP51003 745 aaKnown RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 TAP2Q03519 686 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 KLHL17Q6TDP4 642 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 TMPRSS9Q7Z410 1059 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 XYLT1Q86Y38 959 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 CFAP52Q8N1V2 620 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 BHLHE22Q8NFJ8 381 aaPredicted RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 MDGA1Q8NFP4 955 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 POC1BQ8TC44 478 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 ZNF668Q96K58 619 aaPredicted RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 SLC46A1Q96NT5 459 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 SEC62Q99442 399 aaKnown RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 MPHOSPH9Q99550 1183 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 RTKNQ9BST9 563 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 SLC46A2Q9BY10 475 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 EPC1Q9H2F5 836 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 UBN1Q9NPG3 1134 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 MRPS18AQ9NVS2 196 aaKnown RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 GGA3Q9NZ52 723 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 HDAC5Q9UQL6 1122 aa5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 SETD1BQ9UPS6 1966 aaKnown RBP5.97□□□□□ -1.45
RAB3IP-213ENST00000550647 KAT6BQ8WYB5 2073 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 A0A1B0GTL3 188 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 B9A039 149 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 H7C4K7 107 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 POLRMTO00411 1230 aaKnown RBP5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 ACTL6BO94805 426 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 IPO13O94829 963 aaKnown RBP5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 TK1P04183 234 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 ITGB1P05556 798 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 FCER1AP12319 257 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 PECAM1P16284 738 aaPredicted RBP5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 GNAT2P19087 354 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 ATICP31939 592 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 CDK7P50613 346 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 EPHB4P54760 987 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 AP2B1P63010 937 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 ATP1A4Q13733 1029 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 BOP1Q14137 746 aaKnown RBP5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 NOMO2Q5JPE7 1267 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 MANEALQ5VSG8 457 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 METRNLQ641Q3 311 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 RSRC2Q7L4I2 434 aaKnown RBP5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 MAATS1Q7Z4T9 603 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 CPOQ8IVL8 374 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 TMEM151BQ8IW70 566 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 OR1N1Q8NGS0 311 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 ST8SIA2Q92186 375 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 FAM84AQ96KN4 292 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 SMOQ99835 787 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 TLR10Q9BXR5 811 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 MLXIPQ9HAP2 919 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 RIC8AQ9NPQ8 531 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 FEM1BQ9UK73 627 aa5.96□□□□□ -1.46
RAB3IP-213ENST00000550647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 NOBOXO60393 691 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 COQ9O75208 318 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 PRSS23O95084 383 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 TXKP42681 527 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 AFF3P51826 1226 aaKnown RBP5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 DGKEP52429 567 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 SATB1Q01826 763 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 TIGD6Q17RP2 521 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 ZIK1Q3SY52 487 aaPredicted RBP5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 NAIF1Q69YI7 327 aaPredicted RBP5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 ATG14Q6ZNE5 492 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 RINLQ6ZS11 566 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 HTR3DQ70Z44 454 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 NRSN1Q8IZ57 195 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 OR6Y1Q8NGX8 325 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 PNKPQ96T60 521 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 DPYSL5Q9BPU6 564 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 CPPED1Q9BRF8 314 aaPredicted RBP5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 TRIM5Q9C035 493 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 ZCWPW1Q9H0M4 648 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 TMOD4Q9NZQ9 345 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 LPAR3Q9UBY5 353 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 SMG5Q9UPR3 1016 aaKnown RBP5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 NEU2Q9Y3R4 380 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 SPATA31A3Q5VYP0 1347 aa5.95□□□□□ -1.46
RAB3IP-213ENST00000550647 TCAF2A6NFQ2 919 aa5.94□□□□□ -1.46
RAB3IP-213ENST00000550647 B4GALT4O60513 344 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms