RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SLITRK6Q9H5Y7 841 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 APOBEC3GQ9HC16 384 aaKnown RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 WNT16Q9UBV4 365 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 CDH9Q9ULB4 789 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 MAGED2Q9UNF1 606 aaPredicted RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 FRMD4BQ9Y2L6 1034 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 F5P12259 2224 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 CACNA1IQ9P0X4 2223 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 SLC38A8A6NNN8 435 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 TACC1O75410 805 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ASS1P00966 412 aaKnown RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 F11P03951 625 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 PTPN1P18031 435 aaKnown RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ATICP31939 592 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ASPAP45381 313 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 NLRP12P59046 1061 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 USP46P62068 366 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 CYP27A1Q02318 531 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 SMARCB1Q12824 385 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 NFE2Q16621 373 aaPredicted RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ZNF667Q5HYK9 610 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ARID3BQ8IVW6 561 aaPredicted RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 LEMD2Q8NC56 503 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 RIN3Q8TB24 985 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 MYCBPAPQ8TBZ2 947 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 SPATA18Q8TC71 538 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ELSPBP1Q96BH3 223 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ZNF518BQ9C0D4 1074 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 SNX25Q9H3E2 840 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 VRTNQ9H8Y1 702 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 TBC1D17Q9HA65 648 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ZFP14Q9HCL3 533 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ABCB6Q9NP58 842 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ARHGEF3Q9NR81 526 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 MTF2Q9Y483 593 aaPredicted RBP10.45□□□□□ -0.74
HDAC7-229ENST00000549883 ASB3Q9Y575 518 aa10.45□□□□□ -0.74
HDAC7-229ENST00000549883 HEPACAM2A8MVW5 462 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 A8MXQ7 604 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 PPP1R3GB7ZBB8 358 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 STK25O00506 426 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 IKBKBO14920 756 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 MAPK13O15264 365 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 KINO60870 393 aaKnown RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 CLSTN1O94985 981 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 KIF20AO95235 890 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 SMC2O95347 1197 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 DCNP07585 359 aaKnown RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 GLULP15104 373 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 GDI1P31150 447 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 PIK3CAP42336 1068 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 AP3M2P53677 418 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 MCCD1P59942 119 aaPredicted RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 MORC3Q14149 939 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 VEPH1Q14D04 833 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 CAMK4Q16566 473 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 EDRF1Q3B7T1 1238 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 CFAP221Q4G0U5 840 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 SLC44A4Q53GD3 710 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 COBLL1Q53SF7 1204 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 TXNDC8Q6A555 127 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 KLHL10Q6JEL2 608 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 ITIH5Q86UX2 942 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 ZC3H3Q8IXZ2 948 aaKnown RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 MAB21L3Q8N8X9 362 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 ZFYVE19Q96K21 471 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 TWNKQ96RR1 684 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 SLC22A12Q96S37 553 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 DUSP9Q99956 384 aaKnown RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 HEBP1Q9NRV9 189 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 FAM86C1Q9NVL1 165 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 RMND1Q9NWS8 449 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 MAGEC2Q9UBF1 373 aaPredicted RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 CCL26Q9Y258 94 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 ATG2BQ96BY7 2078 aa10.44□□□□□ -0.74
HDAC7-229ENST00000549883 HELZP42694 1942 aaKnown RBP10.44□□□□□ -0.74
HDAC7-229ENST00000549883 PATJQ8NI35 1801 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 F8VP50 259 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 H0Y858 1186 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 ARNTLO00327 626 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 NOL4O94818 638 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 CCDC130P13994 396 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 AOC1P19801 751 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 RPL13P26373 211 aaKnown RBP10.43□□□□□ -0.74
HDAC7-229ENST00000549883 GRIK1P39086 918 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 MAGEA11P43364 429 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 CLCN5P51795 746 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 NDST1P52848 882 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 STX17P56962 302 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 RPL10AP62906 217 aaKnown RBP10.43□□□□□ -0.74
HDAC7-229ENST00000549883 MLF2Q15773 248 aaPredicted RBP10.43□□□□□ -0.74
HDAC7-229ENST00000549883 TAF12Q16514 161 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 SGSM1Q2NKQ1 1148 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 INTS8Q75QN2 995 aaKnown RBP10.43□□□□□ -0.74
HDAC7-229ENST00000549883 MFSD6LQ8IWD5 586 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 C12orf29Q8N999 325 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 B3GALNT2Q8NCR0 500 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms