RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 CHST7Q9NS84 486 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 SNX24Q9Y343 169 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 SPTLC1O15269 473 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 SNX1Q13596 522 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 TERF2Q15554 542 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 UNC93AQ86WB7 457 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 IPO4Q8TEX9 1081 aaKnown RBP20.19■□□□□ 0.82
BRF1-215ENST00000549655 ATG4AQ8WYN0 398 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 RBM41Q96IZ5 413 aaKnown RBP20.19■□□□□ 0.82
BRF1-215ENST00000549655 CAPNS2Q96L46 248 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 FAM49BQ9NUQ9 324 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 GDAP2Q9NXN4 497 aa20.19■□□□□ 0.82
BRF1-215ENST00000549655 PI4K2BG5E9Z4 385 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 RNF40O75150 1001 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 ECEL1O95672 775 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 KRT1P04264 644 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 FLT3P36888 993 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 CETN2P41208 172 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 GYS2P54840 703 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 CFAP58Q5T655 872 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 TXNRD3NBQ6F5E7 133 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 IQCKQ8N0W5 287 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 EMC1Q8N766 993 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 ZIM3Q96PE6 472 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 DCLK3Q9C098 648 aa20.18■□□□□ 0.82
BRF1-215ENST00000549655 R3HDM2Q9Y2K5 976 aaKnown RBP20.18■□□□□ 0.82
BRF1-215ENST00000549655 A8MXQ7 604 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 PTGESO14684 152 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 TAF6P49848 677 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 DEFB115Q30KQ5 88 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 CCSAPQ6IQ19 270 aaPredicted RBP20.17■□□□□ 0.82
BRF1-215ENST00000549655 RPAINQ86UA6 219 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 KBTBD7Q8WVZ9 684 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 PIK3R5Q8WYR1 880 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 SLCO2A1Q92959 643 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 LRRC45Q96CN5 670 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 ZFP42Q96MM3 310 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 SLITRK1Q96PX8 696 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 RUFY1Q96T51 708 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 ZDHHC18Q9NUE0 388 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 FAM105AQ9NUU6 356 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 GRIN2DO15399 1336 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 DNAH12Q6ZR08 3092 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 E5RJQ4 531 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 RPL21P46778 160 aaKnown RBP20.17■□□□□ 0.82
BRF1-215ENST00000549655 MGAT3Q09327 533 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 PKDCCQ504Y2 493 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 FAM102AQ5T9C2 384 aaPredicted RBP20.17■□□□□ 0.82
BRF1-215ENST00000549655 TTC30AQ86WT1 665 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 ARFGAP1Q8N6T3 406 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 FMO2Q99518 471 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 MIS12Q9H081 205 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 DPEP3Q9H4B8 488 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 CHST12Q9NRB3 414 aa20.17■□□□□ 0.82
BRF1-215ENST00000549655 MEIS3P2A8K0S8 358 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 PIK3R2O00459 728 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 HCRTO43612 131 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 LRCH4O75427 683 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 PDGFRBP09619 1106 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 FGFR1P11362 822 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 CST5P28325 142 aaPredicted RBP20.16■□□□□ 0.82
BRF1-215ENST00000549655 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
BRF1-215ENST00000549655 THPOP40225 353 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 PTGISQ16647 500 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 SV2CQ496J9 727 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 ODF2Q5BJF6 829 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 MFSD7Q6UXD7 560 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 PPP1R10Q96QC0 940 aaKnown RBP20.16■□□□□ 0.82
BRF1-215ENST00000549655 SH3GL2Q99962 352 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 LPIN3Q9BQK8 851 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 HOMER3Q9NSC5 361 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 DDX56Q9NY93 547 aaKnown RBP20.16■□□□□ 0.82
BRF1-215ENST00000549655 GRHL1Q9NZI5 618 aa20.16■□□□□ 0.82
BRF1-215ENST00000549655 RPLP2P05387 115 aaKnown RBP20.15■□□□□ 0.82
BRF1-215ENST00000549655 RGS7P49802 495 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 PLTPP55058 493 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 LILRA4P59901 499 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 PPP1R7Q15435 360 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 ZNF618Q5T7W0 954 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 OR6B2Q6IFH4 312 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 PMF1Q6P1K2 205 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 POLNQ7Z5Q5 900 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 REM2Q8IYK8 340 aaPredicted RBP20.15■□□□□ 0.82
BRF1-215ENST00000549655 APPL2Q8NEU8 664 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 RAPGEF5Q92565 580 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 ACSF2Q96CM8 615 aaPredicted RBP20.15■□□□□ 0.82
BRF1-215ENST00000549655 SNX25Q9H3E2 840 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 HESX1Q9UBX0 185 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 SRRDQ9UH36 339 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 TULP2O00295 520 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 GPR182O15218 404 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 OPA1O60313 960 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 KRT10P13645 584 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 LMO2P25791 158 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 LRPAP1P30533 357 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 GBP1P32455 592 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 HSD17B3P37058 310 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 COPS2P61201 443 aa20.15■□□□□ 0.82
BRF1-215ENST00000549655 SLC25A11Q02978 314 aaKnown RBP20.15■□□□□ 0.82
BRF1-215ENST00000549655 KAZNQ674X7 775 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms