RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 ANKRD1Q15327 319 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 HLA-BQ31612 363 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 XKR9Q5GH70 373 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 WDR45BQ5MNZ6 344 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 IL27RAQ6UWB1 636 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 IL17RCQ8NAC3 791 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 ZNF248Q8NDW4 579 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 APPL2Q8NEU8 664 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 CCDC148Q8NFR7 591 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 ZNF419Q96HQ0 510 aaPredicted RBP9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 PPP1R10Q96QC0 940 aaKnown RBP9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 SLKQ9H2G2 1235 aaPredicted RBP9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 KIF9Q9HAQ2 790 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 C6orf50Q9HD87 102 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 VPS54Q9P1Q0 977 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 PCDHGB2Q9Y5G2 931 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 IGHV1OR15-9A0A0B4J2B8 117 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 A0A1B0GTW7 788 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ESYT2A0FGR8 921 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 PODXLO00592 558 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 N4BP3O15049 544 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ADAMTS3O15072 1205 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 DKC1O60832 514 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 DEXIO95424 95 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 VNN2O95498 520 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 GNA11P29992 359 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 NLRP5P59047 1200 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 NFKB2Q00653 900 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 CAPSQ13938 189 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 EMC10Q5UCC4 262 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 OTUD6AQ7L8S5 288 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ERICH1Q86X53 443 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 BEST2Q8NFU1 509 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 OSCP1Q8WVF1 389 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 DDX12PQ92771 950 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 LIN37Q96GY3 246 aaPredicted RBP9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ADPGKQ9BRR6 497 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ZMYND12Q9H0C1 365 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 MIR1-1HGQ9H1L0 117 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 ZDHHC4Q9NPG8 344 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 HSPBP1Q9NZL4 362 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 GMIPQ9P107 970 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 WNT6Q9Y6F9 365 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 LRBAP50851 2863 aa9.03□□□□□ -0.96
SMARCD1-207ENST00000549526 MYO18AQ92614 2054 aaKnown RBP9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 SMIM28A0A1B0GU29 152 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 ZNF217O75362 1048 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 CDKL5O76039 1030 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 GABRG2P18507 467 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 NMT1P30419 496 aaKnown RBP9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 MCM4P33991 863 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 OPRD1P41143 372 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 NEK4P51957 841 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 MTF1Q14872 753 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 VEPH1Q14D04 833 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 SF3A1Q15459 793 aaKnown RBP9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 TBC1D25Q3MII6 688 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 C8orf34Q49A92 452 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 HSF5Q4G112 596 aaPredicted RBP9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 KIAA1614Q5VZ46 1190 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 TXNDC8Q6A555 127 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 HIST2H2BCQ6DN03 193 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 CENPPQ6IPU0 288 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 SFTPA1Q8IWL2 248 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 EFCAB13Q8IY85 973 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 ATAD1Q8NBU5 361 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 BICD2Q8TD16 824 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 TSC1Q92574 1164 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 FOXJ1Q92949 421 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 SUSD3Q96L08 255 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 PHF12Q96QT6 1004 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 NFKBIZQ9BYH8 718 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 PDZD7Q9H5P4 517 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 LRRC4CQ9HCJ2 640 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 CALCOCO1Q9P1Z2 691 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 CYP8B1Q9UNU6 501 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 MAN2B2Q9Y2E5 1009 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 TMEM131Q92545 1883 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 CACNA1DQ01668 2161 aa9.02□□□□□ -0.97
SMARCD1-207ENST00000549526 CABIN1Q9Y6J0 2220 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 CENPEQ02224 2701 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 MYMKA6NI61 221 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 MEI4A8MW99 385 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 KLK10O43240 276 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 SUV39H1O43463 412 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 PFKFB2O60825 505 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 DTNBO60941 627 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 ADAM23O75077 832 aa9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 POU3F2P20265 443 aaPredicted RBP9.01□□□□□ -0.97
SMARCD1-207ENST00000549526 YWHABP31946 246 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms