RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 MYRFLQ96LU7 910 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 SYT15Q9BQS2 421 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 SLC46A2Q9BY10 475 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 SEMA4AQ9H3S1 761 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 COL4A3Q01955 1670 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 USP34Q70CQ2 3546 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 HCRTO43612 131 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 NOL4O94818 638 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 RHOBTB3O94955 611 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 KIF20AO95235 890 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 GPR15P49685 360 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 FZD5Q13467 585 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 TRPC3Q13507 836 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 WDR72Q3MJ13 1102 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 VSTM1Q6UX27 236 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 CMTM8Q8IZV2 173 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 ZNF687Q8N1G0 1237 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 FSIP1Q8NA03 581 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 CSGALNACT1Q8TDX6 532 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 SYAP1Q96A49 352 aaPredicted RBP19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 CEP295NLQ96MC4 621 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 LRRC3BQ96PB8 259 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 XYLT2Q9H1B5 865 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 PIAS3Q9Y6X2 628 aa19.95■□□□□ 0.78
CHMP1A-207ENST00000549328 NUP210Q8TEM1 1887 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 COL4A2P08572 1712 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 PRR23AA6NEV1 266 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 ATP2C2O75185 946 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 PRAMEF12O95522 483 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 SP9P0CG40 484 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 GNL1P36915 607 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 TNNC1P63316 161 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 PLCB2Q00722 1185 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 KRBA2Q6ZNG9 492 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 ASCL5Q7RTU5 278 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 GPIHBP1Q8IV16 184 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 CELF5Q8N6W0 485 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 PLEKHO2Q8TD55 490 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 BPIFB1Q8TDL5 484 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 FAM3CQ92520 227 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 MRPS31Q92665 395 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 SNX25Q9H3E2 840 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 C8orf33Q9H7E9 229 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 VRTNQ9H8Y1 702 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 CRTAC1Q9NQ79 661 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 SPATA6Q9NWH7 488 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 FBXO4Q9UKT5 387 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 MAGED2Q9UNF1 606 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 TRAF3IP3Q9Y228 551 aa19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 RIF1Q5UIP0 2472 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-207ENST00000549328 SLC38A8A6NNN8 435 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 LAMTOR5O43504 91 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 PHACTR2O75167 634 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 NR3C1P04150 777 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 PDGFRBP09619 1106 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 AVPR1AP37288 418 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 CASP4P49662 377 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MYL6P60660 151 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 DPYDQ12882 1025 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 CCDC142Q17RM4 750 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 ZNF528Q3MIS6 628 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 SDHAF4Q5VUM1 108 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MAMSTRQ6ZN01 415 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MON1AQ86VX9 555 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MAML2Q8IZL2 1156 aaPredicted RBP19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MAB21L3Q8N8X9 362 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MYCBPAPQ8TBZ2 947 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 SPATA17Q96L03 361 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MRPL45Q9BRJ2 306 aaKnown RBP19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 THG1LQ9NWX6 298 aaKnown RBP19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 MYO15AQ9UKN7 3530 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 TICRRQ7Z2Z1 1910 aa19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 PTPRZ1P23471 2315 aaPredicted RBP19.93■□□□□ 0.78
CHMP1A-207ENST00000549328 DENND4CQ5VZ89 1909 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 VPS13AQ96RL7 3174 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 LRRIQ3A6PVS8 624 aaPredicted RBP19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 ZNF202O95125 648 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 C4BPAP04003 597 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 PSMC1P62191 440 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 KCNB1Q14721 858 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 ZC3H14Q6PJT7 736 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 SCN4BQ8IWT1 228 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 OR6B3Q8NGW1 331 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 TMC2Q8TDI7 906 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 MYLPFQ96A32 169 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 CCDC34Q96HJ3 373 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 IER2Q9BTL4 223 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 KIF9Q9HAQ2 790 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 TDP1Q9NUW8 608 aa19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 NDRG2Q9UN36 371 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-207ENST00000549328 IKBKBO14920 756 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 MAPK13O15264 365 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 CALUO43852 315 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 PRR29P0C7W0 189 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 CCNE1P24864 410 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 KPNA1P52294 538 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 BIRC3Q13489 604 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 ZNF268Q14587 947 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 NFIL3Q16649 462 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms