RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 FAM160B1Q5W0V3 765 aa5.19□□□□□ -1.58
CNOT2-216ENST00000548939 EGFLAMQ63HQ2 1017 aa5.19□□□□□ -1.58
CNOT2-216ENST00000548939 MIER2Q8N344 545 aa5.19□□□□□ -1.58
CNOT2-216ENST00000548939 FAM46DQ8NEK8 389 aa5.19□□□□□ -1.58
CNOT2-216ENST00000548939 ABCF2Q9UG63 623 aa5.19□□□□□ -1.58
CNOT2-216ENST00000548939 FEZ2Q9UHY8 353 aaPredicted RBP5.19□□□□□ -1.58
CNOT2-216ENST00000548939 IL6RP08887 468 aaPredicted RBP5.18□□□□□ -1.58
CNOT2-216ENST00000548939 HOXB6P17509 224 aaKnown RBP5.18□□□□□ -1.58
CNOT2-216ENST00000548939 MMP13P45452 471 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 NOGQ13253 232 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 ODF1Q14990 250 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 LAYNQ6UX15 382 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 NAPRTQ6XQN6 538 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 CPA6Q8N4T0 437 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.18□□□□□ -1.58
CNOT2-216ENST00000548939 PNLDC1Q8NA58 520 aaKnown RBP5.18□□□□□ -1.58
CNOT2-216ENST00000548939 MRPL46Q9H2W6 279 aaKnown RBP5.18□□□□□ -1.58
CNOT2-216ENST00000548939 SPC25Q9HBM1 224 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 ANLNQ9NQW6 1124 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 DUSP22Q9NRW4 184 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.18□□□□□ -1.58
CNOT2-216ENST00000548939 ELOVL5Q9NYP7 299 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 SH2B3Q9UQQ2 575 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 WIZO95785 1651 aa5.18□□□□□ -1.58
CNOT2-216ENST00000548939 KCNU1A8MYU2 1149 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 SLC16A6O15403 523 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 TOP3BO95985 862 aaKnown RBP5.17□□□□□ -1.58
CNOT2-216ENST00000548939 ENGP17813 658 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 ZNF134P52741 427 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 PDE1AP54750 535 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 CYP4F2P78329 520 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 HOXA4Q00056 320 aaPredicted RBP5.17□□□□□ -1.58
CNOT2-216ENST00000548939 PTPN21Q16825 1174 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 CATSPERGQ6ZRH7 1159 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 LRRC71Q8N4P6 559 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 RGMAQ96B86 450 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 SLC46A1Q96NT5 459 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 PUS7Q96PZ0 661 aaKnown RBP5.17□□□□□ -1.58
CNOT2-216ENST00000548939 TTYH3Q9C0H2 523 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 SERTAD3Q9UJW9 196 aa5.17□□□□□ -1.58
CNOT2-216ENST00000548939 TSPOAP1O95153 1857 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 SMIM35A0A1B0GVV1 85 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 TRIM38O00635 465 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 DTNBO60941 627 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 KATNA1O75449 491 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 AHSGP02765 367 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 PIM1P11309 404 aaPredicted RBP5.16□□□□□ -1.58
CNOT2-216ENST00000548939 SFPQP23246 707 aaKnown RBP eCLIP5.16□□□□□ -1.58
CNOT2-216ENST00000548939 HK3P52790 923 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 SP2Q02086 613 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 FHL1Q13642 323 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 CHSY1Q86X52 802 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 CNGA4Q8IV77 575 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 GALNT16Q8N428 558 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 C5orf34Q96MH7 638 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 ASB2Q96Q27 587 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 SLC13A1Q9BZW2 595 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 SPRTNQ9H040 489 aaPredicted RBP5.16□□□□□ -1.58
CNOT2-216ENST00000548939 VPS16Q9H269 839 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 HESX1Q9UBX0 185 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 ADAMTS5Q9UNA0 930 aa5.16□□□□□ -1.58
CNOT2-216ENST00000548939 ADAMTS3O15072 1205 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 FTLP02792 175 aaPredicted RBP5.15□□□□□ -1.59
CNOT2-216ENST00000548939 FESP07332 822 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 NPSP0C0P6 89 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 ATXN1LP0C7T5 689 aaKnown RBP5.15□□□□□ -1.59
CNOT2-216ENST00000548939 PDCP20941 246 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 CDK11BP21127 795 aaKnown RBP5.15□□□□□ -1.59
CNOT2-216ENST00000548939 CCND1P24385 295 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 ARHGAP25P42331 645 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 LOXL3P58215 753 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 LONRF3Q496Y0 759 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 TRIM72Q6ZMU5 477 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 PARS2Q7L3T8 475 aaKnown RBP5.15□□□□□ -1.59
CNOT2-216ENST00000548939 TECPR1Q7Z6L1 1165 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 PPP1R3BQ86XI6 285 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 CYP2W1Q8TAV3 490 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 MACROD1Q9BQ69 325 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 FSD1LQ9BXM9 530 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 GLOD4Q9HC38 313 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 LMBRD1Q9NUN5 540 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 TUBA8Q9NY65 449 aaPredicted RBP5.15□□□□□ -1.59
CNOT2-216ENST00000548939 PCDHA1Q9Y5I3 950 aa5.15□□□□□ -1.59
CNOT2-216ENST00000548939 TARBP1Q13395 1621 aaKnown RBP5.15□□□□□ -1.59
CNOT2-216ENST00000548939 RAD54L2Q9Y4B4 1467 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 ABCC8Q09428 1581 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 DCLK1O15075 740 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 ZRANB2O95218 330 aaKnown RBP eCLIP5.14□□□□□ -1.59
CNOT2-216ENST00000548939 TYRP14679 529 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 PPIFP30405 207 aaKnown RBP5.14□□□□□ -1.59
CNOT2-216ENST00000548939 PXNP49023 591 aaPredicted RBP5.14□□□□□ -1.59
CNOT2-216ENST00000548939 PLCD1P51178 756 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 GTF2H3Q13889 308 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 FAM50AQ14320 339 aaKnown RBP5.14□□□□□ -1.59
CNOT2-216ENST00000548939 IQCB1Q15051 598 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 ARHGAP40Q5TG30 622 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 PXDC1Q5TGL8 231 aa5.14□□□□□ -1.59
CNOT2-216ENST00000548939 AWAT2Q6E213 333 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms