RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SNX25Q9H3E2 840 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 C8orf33Q9H7E9 229 aaPredicted RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 IL21Q9HBE4 155 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 TMLHEQ9NVH6 421 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 MAGEC2Q9UBF1 373 aaPredicted RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 FRMD4BQ9Y2L6 1034 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 MYBPHLA2RUH7 354 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 GOLGA6L4A6NEF3 574 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
BEST3-209ENST00000548658 IKBKBO14920 756 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 CALUO43852 315 aaPredicted RBP12.18□□□□□ -0.46
BEST3-209ENST00000548658 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
BEST3-209ENST00000548658 PYGBP11216 843 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 HMGA1P17096 107 aaKnown RBP12.18□□□□□ -0.46
BEST3-209ENST00000548658 CD72P21854 359 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 CYP2F1P24903 491 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 NDUFA8P51970 172 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 NLRP12P59046 1061 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 NUCB2P80303 420 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 CMTM8Q8IZV2 173 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 KIAA0895Q8NCT3 520 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 BPIFB1Q8TDL5 484 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 FAM3CQ92520 227 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 SYT15Q9BQS2 421 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 MKNK1Q9BUB5 465 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 SLC46A2Q9BY10 475 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 VRTNQ9H8Y1 702 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 KIF9Q9HAQ2 790 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 SPATA6Q9NWH7 488 aaPredicted RBP12.18□□□□□ -0.46
BEST3-209ENST00000548658 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 MAGED2Q9UNF1 606 aaPredicted RBP12.18□□□□□ -0.46
BEST3-209ENST00000548658 PIAS3Q9Y6X2 628 aa12.18□□□□□ -0.46
BEST3-209ENST00000548658 MAPK13O15264 365 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 NOL4O94818 638 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 RHOBTB3O94955 611 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 ZNF202O95125 648 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 F11P03951 625 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 NR3C1P04150 777 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 P4HA1P13674 534 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 LMO2P25791 158 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
BEST3-209ENST00000548658 ANXA13P27216 316 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 PDE6CP51160 858 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 KPNA1P52294 538 aaPredicted RBP12.17□□□□□ -0.46
BEST3-209ENST00000548658 BIRC3Q13489 604 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 KCNB1Q14721 858 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 PPP2R5DQ14738 602 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 DDR2Q16832 855 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 STXBP5Q5T5C0 1151 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 SCARA3Q6AZY7 606 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 MON1AQ86VX9 555 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 OSTM1Q86WC4 334 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 RALGPS2Q86X27 583 aaPredicted RBP12.17□□□□□ -0.46
BEST3-209ENST00000548658 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 MYCBPAPQ8TBZ2 947 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 KBTBD7Q8WVZ9 684 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 FAM84AQ96KN4 292 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 SPATA17Q96L03 361 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 KCTD10Q9H3F6 313 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 TRAF3IP3Q9Y228 551 aa12.17□□□□□ -0.46
BEST3-209ENST00000548658 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
BEST3-209ENST00000548658 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 SLC38A8A6NNN8 435 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 ARNTLO00327 626 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 TRIM66O15016 1216 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 MAP3K13O43283 966 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 PDGFRBP09619 1106 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 SP9P0CG40 484 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 PFKLP17858 780 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
BEST3-209ENST00000548658 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
BEST3-209ENST00000548658 GRIK1P39086 918 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 PPP3CCP48454 512 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 CDR1P51861 262 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 MYL6P60660 151 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 CYP4F8P98187 520 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 AMPD2Q01433 879 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 ENPEPQ07075 957 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 DPYDQ12882 1025 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 NCOA4Q13772 614 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 NFIL3Q16649 462 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 ZNF667Q5HYK9 610 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
BEST3-209ENST00000548658 FRMD5Q7Z6J6 570 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 SCN4BQ8IWT1 228 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 GUF1Q8N442 669 aaKnown RBP12.16□□□□□ -0.46
BEST3-209ENST00000548658 MAB21L3Q8N8X9 362 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 TMC2Q8TDI7 906 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 TAF4BQ92750 862 aa12.16□□□□□ -0.46
BEST3-209ENST00000548658 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
BEST3-209ENST00000548658 CRTAC1Q9NQ79 661 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms