RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 IPCEF1Q8WWN9 437 aaPredicted RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 NACC2Q96BF6 587 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 SMOC2Q9H3U7 446 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF768Q9H5H4 540 aaKnown RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 TM7SF3Q9NS93 570 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 TRPM5Q9NZQ8 1165 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 DNMT3BQ9UBC3 853 aaKnown RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 DKK4Q9UBT3 224 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ST6GALNAC2Q9UJ37 374 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ITGB1BP2Q9UKP3 347 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 SHOC2Q9UQ13 582 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 MAN2B2Q9Y2E5 1009 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 TCAF1Q9Y4C2 921 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 RAD54BQ9Y620 910 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 PRAMEF33A0A0G2JMD5 474 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 MYADML2A6NDP7 307 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 K7ESM1 405 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 HNRNPDLO14979 420 aaKnown RBP4.91□□□□□ -1.62
PTCH1-216ENST00000548379 PRAMEF10O60809 474 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 RECQL4O94761 1208 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 SCAF4O95104 1147 aaKnown RBP4.91□□□□□ -1.62
PTCH1-216ENST00000548379 NR4A1P22736 598 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 MAPK10P53779 464 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 CXADRP78310 365 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 FSTL1Q12841 308 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 CRHR2Q13324 411 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 DYRK1AQ13627 763 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 ARHGEF7Q14155 803 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
PTCH1-216ENST00000548379 CDSNQ15517 529 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 CYP2A13Q16696 494 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 BEAN1Q3B7T3 259 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 PLA1AQ53H76 456 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.91□□□□□ -1.62
PTCH1-216ENST00000548379 KIAA0408Q6ZU52 694 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 CLNKQ7Z7G1 428 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF280BQ86YH2 543 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 SYTL1Q8IYJ3 562 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 TXLNBQ8N3L3 684 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 RAPGEF4Q8WZA2 1011 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF566Q969W8 418 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 LOXL4Q96JB6 756 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 PPP1R9BQ96SB3 815 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 HERPUD2Q9BSE4 406 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 POLR3GLQ9BT43 218 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 C1QTNF3Q9BXJ4 246 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 KLC2Q9H0B6 622 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 DEF6Q9H4E7 631 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 CEP72Q9P209 647 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 PRDM2Q13029 1718 aa4.91□□□□□ -1.62
PTCH1-216ENST00000548379 GOLGA6L3A6NEY3 463 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 RNASET2O00584 256 aaKnown RBP4.9□□□□□ -1.63
PTCH1-216ENST00000548379 FFAR2O15552 330 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 RASSF9O75901 435 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 INMTO95050 263 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 FOSP01100 380 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-216ENST00000548379 CHRM3P20309 590 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 LRPAP1P30533 357 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 BMPR1AP36894 532 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 ALDH9A1P49189 494 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 CPT1AP50416 773 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 DGKEP52429 567 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 COPAP53621 1224 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 LILRA4P59901 499 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 SLC25A3Q00325 362 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 GALNT1Q10472 559 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-216ENST00000548379 SLC29A2Q14542 456 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 PUM3Q15397 648 aaKnown RBP4.9□□□□□ -1.63
PTCH1-216ENST00000548379 INSCQ1MX18 579 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 C4orf46Q504U0 113 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 SP5Q6BEB4 398 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-216ENST00000548379 PLAG1Q6DJT9 500 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 ARMC6Q6NXE6 501 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 ZNF585AQ6P3V2 769 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 FOXR2Q6PJQ5 311 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 USP17L6PQ6QN14 398 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 SLC30A10Q6XR72 485 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 ADGRG5Q8IZF4 528 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 IL17DQ8TAD2 202 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 C18orf8Q96DM3 657 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 OSBPL9Q96SU4 736 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 NELL2Q99435 816 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 ADAM2Q99965 735 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 PTDSS2Q9BVG9 487 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 TTYH3Q9C0H2 523 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 FAM83DQ9H4H8 585 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 AS3MTQ9HBK9 375 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 AKIP1Q9NQ31 210 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 NECTIN3Q9NQS3 549 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 RNF181Q9P0P0 153 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 TBC1D30Q9Y2I9 924 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 CDY1Q9Y6F8 540 aa4.9□□□□□ -1.63
PTCH1-216ENST00000548379 ABCC10Q5T3U5 1492 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 FAM234BA2RU67 622 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 H7C4K7 107 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 MUSKO15146 869 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 RRP9O43818 475 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms