RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 LARP4BQ92615 738 aaKnown RBP21.55■■□□□ 1.04
GATC-202ENST00000548171 CD101Q93033 1021 aa21.55■■□□□ 1.04
GATC-202ENST00000548171 ATP2A3Q93084 1043 aa21.55■■□□□ 1.04
GATC-202ENST00000548171 PI4K2AQ9BTU6 479 aa21.55■■□□□ 1.04
GATC-202ENST00000548171 DUS2Q9NX74 493 aaKnown RBP21.55■■□□□ 1.04
GATC-202ENST00000548171 TRAV19A0A0A6YYK7 116 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 MYL7Q01449 175 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 C11orf74Q86VG3 221 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 ABCA7Q8IZY2 2146 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 PDCL2Q8N4E4 241 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 RIN3Q8TB24 985 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 SPATA18Q8TC71 538 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 SMOC1Q9H4F8 434 aa21.54■■□□□ 1.04
GATC-202ENST00000548171 HUS1O60921 280 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 IFNAR2P48551 515 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 GPR15P49685 360 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 CREB5Q02930 508 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 NR1H3Q13133 447 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 DMC1Q14565 340 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 ZNF77Q15935 545 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 ZNF720Q7Z2F6 126 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 POLR3BQ9NW08 1133 aaPredicted RBP21.53■■□□□ 1.04
GATC-202ENST00000548171 DDX43Q9NXZ2 648 aaKnown RBP21.53■■□□□ 1.04
GATC-202ENST00000548171 FAM208BQ5VWN6 2430 aa21.53■■□□□ 1.04
GATC-202ENST00000548171 BCLAF3A2AJT9 711 aaKnown RBP21.52■■□□□ 1.04
GATC-202ENST00000548171 TADA3O75528 432 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 CKMP06732 381 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 CYP2F1P24903 491 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 ADSSP30520 456 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 DDIT3P35638 169 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 USP4Q13107 963 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 DDR2Q16832 855 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 CFAP221Q4G0U5 840 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 INTS6LQ5JSJ4 861 aaKnown RBP21.52■■□□□ 1.04
GATC-202ENST00000548171 SDHAF4Q5VUM1 108 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 TCEAL6Q6IPX3 200 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 LRRC52Q8N7C0 313 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 FSIP1Q8NA03 581 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 CACTINQ8WUQ7 758 aaKnown RBP21.52■■□□□ 1.04
GATC-202ENST00000548171 TCEAL3Q969E4 200 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 EDEM2Q9BV94 578 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 AGAP1Q9UPQ3 857 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 EXOC7Q9UPT5 735 aa21.52■■□□□ 1.04
GATC-202ENST00000548171 PPP1R37O75864 691 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 CAVIN2O95810 425 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 TCF3P15923 654 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 GJB2P29033 226 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 POLR2BP30876 1174 aaKnown RBP21.51■■□□□ 1.03
GATC-202ENST00000548171 PDE6CP51160 858 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 TFAMQ00059 246 aaKnown RBP21.51■■□□□ 1.03
GATC-202ENST00000548171 EML3Q32P44 896 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 DAB2IPQ5VWQ8 1189 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 PSAPL1Q6NUJ1 521 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 STKLD1Q8NE28 680 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 FUBP3Q96I24 572 aaKnown RBP eCLIP21.51■■□□□ 1.03
GATC-202ENST00000548171 PKMYT1Q99640 499 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 TRPC7Q9HCX4 862 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 SEL1LQ9UBV2 794 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 L1RE1Q9UN81 338 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 PTPRDP23468 1912 aa21.51■■□□□ 1.03
GATC-202ENST00000548171 CFAP47Q6ZTR5 3102 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 DCLK1O15075 740 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 ITGB3P05106 788 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 PROS1P07225 676 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 GBP1P32455 592 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 LHX1P48742 406 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 PSMD2Q13200 908 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 RABEP1Q15276 862 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 USP39Q53GS9 565 aaKnown RBP21.5■■□□□ 1.03
GATC-202ENST00000548171 NAIF1Q69YI7 327 aaPredicted RBP21.5■■□□□ 1.03
GATC-202ENST00000548171 SFR1Q86XK3 245 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 SPATA2LQ8IUW3 424 aaPredicted RBP21.5■■□□□ 1.03
GATC-202ENST00000548171 BRSK2Q8IWQ3 736 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 TOP6BLQ8N6T0 577 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 TSTD1Q8NFU3 115 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 EZH1Q92800 747 aaPredicted RBP21.5■■□□□ 1.03
GATC-202ENST00000548171 SLC22A12Q96S37 553 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 CYP2S1Q96SQ9 504 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 FAM213AQ9BRX8 229 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 STRA6Q9BX79 667 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 GDAP2Q9NXN4 497 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 GTF3C4Q9UKN8 822 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 ITGA11Q9UKX5 1188 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 WNT6Q9Y6F9 365 aa21.5■■□□□ 1.03
GATC-202ENST00000548171 C4orf47A7E2U8 309 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 NFATC1O95644 943 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 LDHAP00338 332 aaKnown RBP21.49■■□□□ 1.03
GATC-202ENST00000548171 ACAT1P24752 427 aaKnown RBP21.49■■□□□ 1.03
GATC-202ENST00000548171 PCSK1P29120 753 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 MAGEA11P43364 429 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 NOVA1P51513 510 aaKnown RBP21.49■■□□□ 1.03
GATC-202ENST00000548171 DGKEP52429 567 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 KCNB1Q14721 858 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 C1orf127Q8N9H9 656 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 TMX3Q96JJ7 454 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 CEP295NLQ96MC4 621 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 ACCSQ96QU6 501 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 IKZF4Q9H2S9 585 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 MRPL44Q9H9J2 332 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms