RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 LRMPQ12912 555 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 PLD1Q13393 1074 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 ORC1Q13415 861 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 NFE2Q16621 373 aaPredicted RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 TPD52L1Q16890 204 aaPredicted RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 SLC5A9Q2M3M2 681 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 MDH1BQ5I0G3 518 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 IQCEQ6IPM2 695 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 FAM171BQ6P995 826 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 RBM43Q6ZSC3 357 aaKnown RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 OTOP3Q7RTS5 596 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 SPATA2LQ8IUW3 424 aaPredicted RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 ELMOD1Q8N336 334 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 CCDC150Q8NCX0 1101 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 STKLD1Q8NE28 680 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 FBXL13Q8NEE6 735 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 FAM200AQ8TCP9 573 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 SPPL2BQ8TCT7 592 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 GPR152Q8TDT2 470 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 C2orf15Q8WU43 125 aaKnown RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 ING5Q8WYH8 240 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 TCEAL4Q96EI5 215 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 ZNF512Q96ME7 567 aaPredicted RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 IMPG2Q9BZV3 1241 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 RAB20Q9NX57 234 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 TMEM63CQ9P1W3 806 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 HMGXB4Q9UGU5 601 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 RAPGEFL1Q9UHV5 662 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 MUTYHQ9UIF7 546 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 RABGEF1Q9UJ41 708 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 USTQ9Y2C2 406 aa9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 MRPS23Q9Y3D9 190 aaKnown RBP9.49□□□□□ -0.89
SMARCC2-205ENST00000548130 DOCK6Q96HP0 2047 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 TSC2P49815 1807 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CCDC192P0DO97 292 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 MYL4P12829 197 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 GJA1P17302 382 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 PTPN1P18031 435 aaKnown RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 ATF6P18850 670 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CD58P19256 250 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 COL9A1P20849 921 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 ERCC5P28715 1186 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CCR2P41597 374 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 FMO5P49326 533 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 NDST1P52848 882 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CYP27A1Q02318 531 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 DDR2Q16832 855 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 WDR44Q5JSH3 913 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CYP4A22Q5TCH4 519 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 SASS6Q6UVJ0 657 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 PDZD4Q76G19 769 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 DNAJB7Q7Z6W7 309 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 TRIM59Q8IWR1 403 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 SCN4BQ8IWT1 228 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 ZDHHC14Q8IZN3 488 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 MYCBPAPQ8TBZ2 947 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 TATDN2Q93075 761 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 ACSF2Q96CM8 615 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 PCED1BQ96HM7 432 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CNOT6LQ96LI5 555 aaKnown RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 BCO2Q9BYV7 579 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 ZNF334Q9HCZ1 680 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 ASAH2Q9NR71 780 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 HSFX1Q9UBD0 423 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 CDH7Q9ULB5 785 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 REV3LO60673 3130 aa9.48□□□□□ -0.89
SMARCC2-205ENST00000548130 MTCL1Q9Y4B5 1905 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 CLDN5O00501 218 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 MOSPD3O75425 235 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 LAMP2P13473 410 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 CEBPBP17676 345 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 BDNFP23560 247 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 VEPH1Q14D04 833 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 MAPRE1Q15691 268 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 HSP90AA4PQ58FG1 418 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 PRSS36Q5K4E3 855 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 C4orf50Q6ZRC1 276 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 C11orf57Q6ZUT1 292 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 ACOT1Q86TX2 421 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 ITIH5Q86UX2 942 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 TMC8Q8IU68 726 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 IRF2BP1Q8IU81 584 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 B3GALNT2Q8NCR0 500 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 RSAD2Q8WXG1 361 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 FGF13Q92913 245 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 PSMG2Q969U7 264 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 MCRS1Q96EZ8 462 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 TWNKQ96RR1 684 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 ARID3AQ99856 593 aa9.47□□□□□ -0.89
SMARCC2-205ENST00000548130 LRRC3Q9BY71 257 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms