RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 NLRC4Q9NPP4 1024 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 KIAA1257Q9ULG3 409 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 SLC27A5Q9Y2P5 690 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 FOXN3O00409 490 aaPredicted RBP24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 USP8P40818 1118 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 TUFMP49411 452 aaKnown RBP24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 ZNF132P52740 706 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 CYFIP2Q96F07 1278 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 B3GNT5Q9BYG0 378 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 FAM49BQ9NUQ9 324 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 CEP72Q9P209 647 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 TBX10O75333 385 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 ZMYND10O75800 440 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 CCDC130P13994 396 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 HOXB8P17481 243 aaPredicted RBP24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 MGAT5BQ3V5L5 792 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 PPM1LQ5SGD2 360 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 ANKRD54Q6NXT1 300 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 CACNA2D4Q7Z3S7 1137 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 SPAG5Q96R06 1193 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 MED10Q9BTT4 135 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 PRDM6Q9NQX0 595 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 CLEC1BQ9P126 229 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 INSL5Q9Y5Q6 135 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 ATP8B3O60423 1300 aa24.62■■□□□ 1.53
SMARCD1-203ENST00000547247 AP5Z1O43299 807 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 HAPLN1P10915 354 aaPredicted RBP24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 VDRP11473 427 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 CD19P15391 556 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 BDNFP23560 247 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 CYP2F1P24903 491 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 LTBRP36941 435 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 DLX2Q07687 328 aaPredicted RBP24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 SGO2Q562F6 1265 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 FUKQ8N0W3 1084 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 TTC9BQ8N6N2 239 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 SLC2A14Q8TDB8 520 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 SEPT5Q99719 369 aaPredicted RBP24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 HNRNPABQ99729 332 aaKnown RBP24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 GPR88Q9GZN0 384 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 SFXN1Q9H9B4 322 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 ZDHHC7Q9NXF8 308 aa24.61■■□□□ 1.53
SMARCD1-203ENST00000547247 F8VZ95 297 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 CLDN5O00501 218 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 RFPL2O75678 378 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 LRG1P02750 347 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 MAGEA11P43364 429 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 PPP1R26Q5T8A7 1209 aaPredicted RBP24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 VSTM1Q6UX27 236 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 FAM71AQ8IYT1 594 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 NUP58Q9BVL2 599 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 RHOBTB2Q9BYZ6 727 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 ZNF518BQ9C0D4 1074 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 UBE2ZQ9H832 354 aaPredicted RBP24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 YIPF1Q9Y548 306 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 XIRP2A4UGR9 3374 aa24.6■■□□□ 1.53
SMARCD1-203ENST00000547247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 HNRNPA1P09651 372 aaKnown RBP eCLIP24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 PNMA6AP0CW24 399 aaPredicted RBP24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 HOXA9P31269 272 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 ALDH1A3P47895 512 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 JAM2P57087 298 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 FIGNQ5HY92 759 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 ARHGAP17Q68EM7 881 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 PAQR9Q6ZVX9 377 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 FAM35AQ86V20 835 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 HLA-CQ95604 372 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 UNC80Q8N2C7 3258 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 CYP26A1O43174 497 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 ADORA2BP29275 332 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 PTK2Q05397 1052 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 PLD1Q13393 1074 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 SYCE2Q6PIF2 218 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 C12orf76Q8N812 135 aaPredicted RBP24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 CMASQ8NFW8 434 aaPredicted RBP24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 IQCDQ96DY2 449 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 SMARCD1Q96GM5 515 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 EDEM3Q9BZQ6 932 aa24.59■■□□□ 1.53
SMARCD1-203ENST00000547247 ITIH6Q6UXX5 1313 aa24.58■■□□□ 1.53
SMARCD1-203ENST00000547247 CCDC195A0A1B0GUA6 201 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 SOAT2O75908 522 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 GRIK1P39086 918 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 STAT1P42224 750 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 BPIFB4P59827 614 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 RPL10AP62906 217 aaKnown RBP24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 TWF1Q12792 350 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 SCN4BQ8IWT1 228 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 MSLNLQ96KJ4 702 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 PRKD2Q9BZL6 878 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 TTYH3Q9C0H2 523 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 KRT82Q9NSB4 513 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 COG5Q9UP83 839 aa24.58■■□□□ 1.52
SMARCD1-203ENST00000547247 BRD2P25440 801 aaKnown RBP24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 GNA15P30679 374 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 CLCN1P35523 988 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 SOX5P35711 763 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 EPHB3P54753 998 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 STILQ15468 1287 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 RARS2Q5T160 578 aaKnown RBP24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 TMC5Q6UXY8 1006 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms