RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 SPRYD7Q5W111 196 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 MAMDC4Q6UXC1 1216 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PHF13Q86YI8 300 aaPredicted RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 ACTL9Q8TC94 416 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 ABHD16BQ9H3Z7 469 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 TMEM51Q9NW97 253 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PCYOX1Q9UHG3 505 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 MEIS3P2A8K0S8 358 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 MAGEB2O15479 319 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 IVLP07476 585 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 SMIM10L2AP0DMW4 78 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 SMIM10L2BP0DMW5 78 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PTP4A2Q12974 167 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 SURF1Q15526 300 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PPP2R5EQ16537 467 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 SPOCD1Q6ZMY3 1216 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 CLEC4CQ8WTT0 213 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 MAK16Q9BXY0 300 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 MAGED2Q9UNF1 606 aaPredicted RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PTPRFP10586 1907 aa13.4□□□□□ -0.27
SCAF11-209ENST00000547018 IGF2BP3O00425 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 SLC1A1P43005 524 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 SLC26A2P50443 739 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 HADHBP55084 474 aaKnown RBP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 PPP2R2AP63151 447 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 OTUD4Q01804 1114 aaKnown RBP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 GNASQ5JWF2 1037 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 MARCH8Q5T0T0 291 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 CCDC89Q8N998 374 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 FAM71DQ8N9W8 422 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 SNF8Q96H20 258 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■□□□□ 10.5
SCAF11-209ENST00000547018 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 SCN1AP35498 2009 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 TNPO2O14787 897 aaKnown RBP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 ASAP2O43150 1006 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 B4GALT4O60513 344 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 MTA2O94776 668 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 LMO2P25791 158 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 MIPP30301 263 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 TMED2Q15363 201 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 CTU1Q7Z7A3 348 aaKnown RBP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 RSAD2Q8WXG1 361 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 LPPQ93052 612 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 CCT8L2Q96SF2 557 aa13.39□□□□□ -0.27
SCAF11-209ENST00000547018 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
SCAF11-209ENST00000547018 SBF1O95248 1867 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 H7C0C1 242 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 I3L4J1 428 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 RIPK2O43353 540 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 SPAG7O75391 227 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 CHN1P15882 459 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 ATP5OP48047 213 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 RBP5P82980 135 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 HIC1Q14526 733 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 BSPRYQ5W0U4 402 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 ZBED8Q8IZ13 594 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 MREGQ8N565 214 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 MORC4Q8TE76 937 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 RXFP2Q8WXD0 754 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 RUBCNQ92622 972 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 SLITRK1Q96PX8 696 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 ZIC5Q96T25 663 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 GAS2O43903 313 aaKnown RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 LRCH4O75427 683 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 TJP3O95049 919 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 BBS9Q3SYG4 887 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 MICALL1Q8N3F8 863 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 KLF6Q99612 283 aaPredicted RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 PIH1D1Q9NWS0 290 aaKnown RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 H0YHG0 523 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 MYO1CO00159 1063 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 CLDN5O00501 218 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 MED7O43513 233 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 STRNO43815 780 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 PPFIA2O75334 1257 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 P4HA1P13674 534 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 AFF1P51825 1210 aaKnown RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 AP3M2P53677 418 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 GDF10P55107 478 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 KRT81Q14533 505 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 ZC3H12AQ5D1E8 599 aaKnown RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 HOOK3Q86VS8 718 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 EXOC8Q8IYI6 725 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms