RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 HSCBQ8IWL3 235 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 GPR161Q8N6U8 529 aaKnown RBP20.09■□□□□ 0.81
CHPT1-202ENST00000546490 STKLD1Q8NE28 680 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 OR5B17Q8NGF7 314 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 RMDN1Q96DB5 314 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 TRMT2BQ96GJ1 504 aaKnown RBP20.09■□□□□ 0.81
CHPT1-202ENST00000546490 HPDLQ96IR7 371 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 PKMYT1Q99640 499 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 GMEB2Q9UKD1 530 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 RAB23Q9ULC3 237 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 CEP250Q9BV73 2442 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 MYO16Q9Y6X6 1858 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 RALGAPA1Q6GYQ0 2036 aa20.09■□□□□ 0.81
CHPT1-202ENST00000546490 GABRDO14764 452 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 NOL4O94818 638 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 CYP2F1P24903 491 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 GAS6Q14393 721 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 DDR2Q16832 855 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 SOWAHAQ2M3V2 549 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 SDHAF4Q5VUM1 108 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 C4orf50Q6ZRC1 276 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 Q6ZS52 159 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 EPM2AIP1Q7L775 607 aaPredicted RBP20.08■□□□□ 0.81
CHPT1-202ENST00000546490 USP13Q92995 863 aaPredicted RBP20.08■□□□□ 0.81
CHPT1-202ENST00000546490 SYT15Q9BQS2 421 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 TDP1Q9NUW8 608 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 CCL26Q9Y258 94 aa20.08■□□□□ 0.81
CHPT1-202ENST00000546490 PAPSS2O95340 614 aaPredicted RBP20.07■□□□□ 0.8
CHPT1-202ENST00000546490 HOXD13P35453 343 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 CCINQ13939 588 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 ZNF268Q14587 947 aaPredicted RBP20.07■□□□□ 0.8
CHPT1-202ENST00000546490 SNRNP35Q16560 246 aaKnown RBP20.07■□□□□ 0.8
CHPT1-202ENST00000546490 CCDC142Q17RM4 750 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 FOXD4L5Q5VV16 416 aaPredicted RBP20.07■□□□□ 0.8
CHPT1-202ENST00000546490 TXNDC8Q6A555 127 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 SCARA3Q6AZY7 606 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 CC2D1AQ6P1N0 951 aaPredicted RBP20.07■□□□□ 0.8
CHPT1-202ENST00000546490 UNC13DQ70J99 1090 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 MON1AQ86VX9 555 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 SYNPOQ8N3V7 929 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 ZNF507Q8TCN5 953 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 FOXD4L4Q8WXT5 416 aaPredicted RBP20.07■□□□□ 0.8
CHPT1-202ENST00000546490 MYRFLQ96LU7 910 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 C7orf25Q9BPX7 421 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 AGPAT3Q9NRZ7 376 aa20.07■□□□□ 0.8
CHPT1-202ENST00000546490 HCRTO43612 131 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 TADA3O75528 432 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 F13A1P00488 732 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 MAGEA11P43364 429 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 SNRPFP62306 86 aaKnown RBP20.06■□□□□ 0.8
CHPT1-202ENST00000546490 RUNX3Q13761 415 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 PUM1Q14671 1186 aaKnown RBP eCLIP20.06■□□□□ 0.8
CHPT1-202ENST00000546490 MAPRE1Q15691 268 aaKnown RBP20.06■□□□□ 0.8
CHPT1-202ENST00000546490 WDR44Q5JSH3 913 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 HS2ST1Q7LGA3 356 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 SCN4BQ8IWT1 228 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 KBTBD7Q8WVZ9 684 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 FNBP1Q96RU3 617 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 FAM83CQ9BQN1 747 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 TRPC7Q9HCX4 862 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 GKN1Q9NS71 199 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 FAM13BQ9NYF5 915 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 CDH9Q9ULB4 789 aa20.06■□□□□ 0.8
CHPT1-202ENST00000546490 POLR2DO15514 142 aaKnown RBP20.05■□□□□ 0.8
CHPT1-202ENST00000546490 CKMP06732 381 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 ZSCAN22P10073 491 aaPredicted RBP20.05■□□□□ 0.8
CHPT1-202ENST00000546490 DLATP10515 647 aaKnown RBP20.05■□□□□ 0.8
CHPT1-202ENST00000546490 TNNI1P19237 187 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 ME1P48163 572 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 CYP2J2P51589 502 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 PSMC1P62191 440 aaKnown RBP20.05■□□□□ 0.8
CHPT1-202ENST00000546490 AMPD2Q01433 879 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
CHPT1-202ENST00000546490 LAIR1Q6GTX8 287 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 FAM171BQ6P995 826 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
CHPT1-202ENST00000546490 DGLUCYQ7Z3D6 616 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 LIMS2Q7Z4I7 341 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 NELFCDQ8IXH7 590 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 FSIP1Q8NA03 581 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 MYLPFQ96A32 169 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 MMS19Q96T76 1030 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 CGRRF1Q99675 332 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 EBF3Q9H4W6 596 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 HPS4Q9NQG7 708 aa20.05■□□□□ 0.8
CHPT1-202ENST00000546490 SPAG17Q6Q759 2223 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 TRAV19A0A0A6YYK7 116 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 TGFB1I1O43294 461 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 WARSP23381 471 aaKnown RBP20.04■□□□□ 0.8
CHPT1-202ENST00000546490 FAM160A1Q05DH4 1040 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 EHHADHQ08426 723 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 PSMD6Q15008 389 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 TRIM68Q6AZZ1 485 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 VSTM1Q6UX27 236 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 PRR23BQ6ZRT6 265 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 TRAPPC11Q7Z392 1133 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 LONP2Q86WA8 852 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 XXYLT1Q8NBI6 393 aa20.04■□□□□ 0.8
CHPT1-202ENST00000546490 RDH13Q8NBN7 331 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms