RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 P4HBP07237 508 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 ATP6V1B1P15313 513 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 TCN1P20061 433 aaPredicted RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 UBAP2LQ14157 1087 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 RBBP5Q15291 538 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 CLEC16AQ2KHT3 1053 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 GRAMD1BQ3KR37 738 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 IZUMO2Q6UXV1 221 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 MOB2Q70IA6 237 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 RBBP8NLQ8NC74 664 aaPredicted RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 OR5B17Q8NGF7 314 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 CCDC110Q8TBZ0 833 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 NMD3Q96D46 503 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 TEPSINQ96N21 525 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 SENP7Q9BQF6 1050 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 CADM1Q9BY67 442 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 ROPN1BQ9BZX4 212 aaPredicted RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 NMUR2Q9GZQ4 415 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 GLT8D2Q9H1C3 349 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 MANSC1Q9H8J5 431 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 ROPN1Q9HAT0 212 aaPredicted RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 UGT1A7Q9HAW7 530 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 UGT1A10Q9HAW8 530 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 UGT1A8Q9HAW9 530 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 GTPBP10A4D1E9 387 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 DCTN3O75935 186 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 CACNA2D1P54289 1103 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 FAAP100Q0VG06 881 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 RAB6CQ53S08 254 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 TCHHL1Q5QJ38 904 aaPredicted RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 DARS2Q6PI48 645 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 SULF1Q8IWU6 871 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 GMCL1P1Q8NEA9 526 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 HELQQ8TDG4 1101 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 PSPC1Q8WXF1 523 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 RAB6CQ9H0N0 254 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 WHRNQ9P202 907 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 XPO7Q9UIA9 1087 aaKnown RBP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 MYOCOSA0A1B0GUC4 107 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 TBX10O75333 385 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 APRTP07741 180 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 NELFEP18615 380 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 CALRP27797 417 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 PHKA2P46019 1235 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 PGGT1BP53609 377 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 RPS6P62753 249 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 STAT4Q14765 748 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 BTNL9Q6UXG8 535 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 KCTD6Q8NC69 237 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 FGD4Q96M96 766 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 TUFT1Q9NNX1 390 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 PGM3O95394 542 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 T-ENOLP0DO92 83 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 RGS7P49802 495 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 PAPOLAP51003 745 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 SLC25A3Q00325 362 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 PTK7Q13308 1070 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 FKBP1CQ5VVH2 108 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 DCAF15Q66K64 600 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 CES3Q6UWW8 571 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 MTMR14Q8NCE2 650 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 IMPG2Q9BZV3 1241 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 LRRC19Q9H756 370 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 MRPL11Q9Y3B7 192 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 MYO18AQ92614 2054 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 FRMPD4Q14CM0 1322 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 GJB1P08034 283 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 GLRA2P23416 452 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 IVDP26440 423 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 SLC8A3P57103 927 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 CLNKQ7Z7G1 428 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 SPNS2Q8IVW8 549 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
HOXC11-202ENST00000546378 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
HOXC11-202ENST00000546378 FSCN2O14926 492 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 MAP3K7O43318 606 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 LYPLA1O75608 230 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 IGBP1P78318 339 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 SHC3Q92529 594 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 ABTB1Q969K4 478 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 SLC7A6OSQ96CW6 309 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 PGBD4Q96DM1 585 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 DDX27Q96GQ7 796 aaKnown RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 MSTO1Q9BUK6 570 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 RPAP3Q9H6T3 665 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 RBAKQ9NYW8 714 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 UVRAGQ9P2Y5 699 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 PTPRJQ12913 1337 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 TRIM49D1C9J1S8 452 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 LUC7L3O95232 432 aaKnown RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 MAN1A1P33908 653 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 ELK3P41970 407 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 GTF2A2P52657 109 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 BLMHQ13867 455 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 SH3PXD2AQ5TCZ1 1133 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms