RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MRPL42Q9Y6G3 142 aaKnown RBP6.85□□□□□ -1.31
PRKDC-211ENST00000546304 PRRC2BQ5JSZ5 2229 aaKnown RBP6.85□□□□□ -1.31
PRKDC-211ENST00000546304 COL6A3P12111 3177 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 PTPRJQ12913 1337 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 SMIM28A0A1B0GU29 152 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CASTOR2A6NHX0 329 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 SOWAHDA6NJG2 315 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 LACTBL1A8MY62 500 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CETN3O15182 167 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 MAPK13O15264 365 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ALX3O95076 343 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 WISP1O95388 367 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 THP07101 528 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 DLATP10515 647 aaKnown RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CDC25BP30305 580 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CTNNB1P35222 781 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 PBX3P40426 434 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CASP4P49662 377 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 FKBP3Q00688 224 aaKnown RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 TAP1Q03518 808 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 SOX4Q06945 474 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 SPAG1Q07617 926 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ADAM9Q13443 819 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 TUSC3Q13454 348 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 PSMD6Q15008 389 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 NAB2Q15742 525 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ANO6Q4KMQ2 910 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CT47A1Q5JQC4 288 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 SPOUT1Q5T280 376 aaKnown RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ANKRD40Q6AI12 368 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 JADE1Q6IE81 842 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ALKAL1Q6UXT8 129 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 INTS8Q75QN2 995 aaKnown RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 WDR49Q8IV35 697 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CD302Q8IX05 232 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 FAM186BQ8IYM0 893 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CSGALNACT2Q8N6G5 542 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 C18orf25Q96B23 403 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CCDC127Q96BQ5 260 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 KLHDC7BQ96G42 594 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 CGRRF1Q99675 332 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 FUCA2Q9BTY2 467 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 MTMR12Q9C0I1 747 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 NKX2-4Q9H2Z4 354 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 ASB7Q9H672 318 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 GOLGA2P5Q9HBQ8 144 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 PDE11AQ9HCR9 933 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 LATS2Q9NRM7 1088 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 UBQLN1Q9UMX0 589 aaKnown RBP6.84□□□□□ -1.31
PRKDC-211ENST00000546304 DERAQ9Y315 318 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 RWDD3Q9Y3V2 267 aa6.84□□□□□ -1.31
PRKDC-211ENST00000546304 SPTBN5Q9NRC6 3674 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 XIRP2A4UGR9 3374 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TMEM265A0A087WTH1 108 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 DDHD2O94830 711 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TMEM191BP0C7N4 346 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TRIM49P0CI25 452 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TRIM49CP0CI26 452 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 KRT13P13646 458 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 PPM1AP35813 382 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 PSMC2P35998 433 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SLC11A1P49279 550 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 GUCY2FP51841 1108 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 BCAR1P56945 870 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TFAMQ00059 246 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 MYL5Q02045 173 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 ENPEPQ07075 957 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 BFSP1Q12934 665 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SURF1Q15526 300 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TPD52L1Q16890 204 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 CCDC40Q4G0X9 1142 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 DCAF17Q5H9S7 520 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 LMBRD2Q68DH5 695 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 VN1R5Q7Z5H4 357 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 USP37Q86T82 979 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TMEM173Q86WV6 379 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 ZNF280BQ86YH2 543 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 COLGALT2Q8IYK4 626 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 COLGALT1Q8NBJ5 622 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 BEST2Q8NFU1 509 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 PLEKHO2Q8TD55 490 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 FAM84AQ96KN4 292 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 CNOT6LQ96LI5 555 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 UROC1Q96N76 676 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 ZNF558Q96NG5 402 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SAMD11Q96NU1 681 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 FAM193BQ96PV7 902 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 MED15Q96RN5 788 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TGS1Q96RS0 853 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 FNBP1Q96RU3 617 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 TSPAN18Q96SJ8 248 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms