RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 LMO3Q8TAP4 145 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 GIPC2Q8TF65 315 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 PCED1BQ96HM7 432 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 NECAB3Q96P71 396 aaPredicted RBP17.91■□□□□ 0.46
LTBR-215ENST00000546296 ARID3AQ99856 593 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 BPIFA3Q9BQP9 254 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 FUCA2Q9BTY2 467 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 TAB2Q9NYJ8 693 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 CEP72Q9P209 647 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 HMGXB4Q9UGU5 601 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 ATP8B3O60423 1300 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 CILPO75339 1184 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 RHOP08100 348 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 GRIK1P39086 918 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 MAGEA11P43364 429 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 ZP2Q05996 745 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 DDR2Q16832 855 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 ZNF394Q53GI3 561 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 OTOP3Q7RTS5 596 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 DNAJB7Q7Z6W7 309 aaPredicted RBP17.9■□□□□ 0.46
LTBR-215ENST00000546296 GPR152Q8TDT2 470 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 ACSF2Q96CM8 615 aaPredicted RBP17.9■□□□□ 0.46
LTBR-215ENST00000546296 HEXIM2Q96MH2 286 aaKnown RBP17.9■□□□□ 0.46
LTBR-215ENST00000546296 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 VPS16Q9H269 839 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 FAM124BQ9H5Z6 455 aaPredicted RBP17.9■□□□□ 0.46
LTBR-215ENST00000546296 ASAH2Q9NR71 780 aa17.9■□□□□ 0.46
LTBR-215ENST00000546296 MRPS23Q9Y3D9 190 aaKnown RBP17.9■□□□□ 0.46
LTBR-215ENST00000546296 GTPBP10A4D1E9 387 aaKnown RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 CLDN5O00501 218 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 ZNF197O14709 1029 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 MYL4P12829 197 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 SLC9A1P19634 815 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 ANXA13P27216 316 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 GBP2P32456 591 aaPredicted RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 GPR15P49685 360 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 NCAPHQ15003 741 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 KRT31Q15323 416 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 MIIPQ5JXC2 388 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 VSTM1Q6UX27 236 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 PDZD4Q76G19 769 aaPredicted RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 GET4Q7L5D6 327 aaPredicted RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 ARHGEF19Q8IW93 802 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 HS6ST3Q8IZP7 471 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 TDRD5Q8NAT2 981 aaKnown RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 PSMG2Q969U7 264 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 TMEM176AQ96HP8 235 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 TWNKQ96RR1 684 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 ELOVL4Q9GZR5 314 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 UBE2TQ9NPD8 197 aaPredicted RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 FAM49BQ9NUQ9 324 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 PCDHB4Q9Y5E5 795 aa17.89■□□□□ 0.45
LTBR-215ENST00000546296 MTCL1Q9Y4B5 1905 aaKnown RBP17.89■□□□□ 0.45
LTBR-215ENST00000546296 A0A0C4DFX4 3053 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 ATF6P18850 670 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 TRIM65Q6PJ69 517 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 GJD3Q8N144 294 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 C12orf29Q8N999 325 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 LEMD2Q8NC56 503 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 SLC2A14Q8TDB8 520 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 WHAMMQ8TF30 809 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 ZNF518BQ9C0D4 1074 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.88■□□□□ 0.45
LTBR-215ENST00000546296 USTQ9Y2C2 406 aa17.88■□□□□ 0.45
LTBR-215ENST00000546296 C2CD4DB7Z1M9 353 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 LOC730098B7Z3J9 87 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 TRIM66O15016 1216 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 CAVIN2O95810 425 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 CCDC130P13994 396 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 PON1P27169 355 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 RAD23BP54727 409 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 MFAP3P55082 362 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 GCNT1Q02742 428 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 FKBP15Q5T1M5 1219 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 PHLDB3Q6NSJ2 640 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 DHX40Q8IX18 779 aaKnown RBP17.87■□□□□ 0.45
LTBR-215ENST00000546296 PLCD3Q8N3E9 789 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 KAT5Q92993 513 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 CYFIP2Q96F07 1278 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 FAM81BQ96LP2 452 aa17.87■□□□□ 0.45
LTBR-215ENST00000546296 AVENQ9NQS1 362 aaPredicted RBP17.87■□□□□ 0.45
LTBR-215ENST00000546296 LIMA1Q9UHB6 759 aaKnown RBP17.87■□□□□ 0.45
LTBR-215ENST00000546296 MAGED2Q9UNF1 606 aaPredicted RBP17.87■□□□□ 0.45
LTBR-215ENST00000546296 C19orf67A6NJJ6 358 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 SLC38A8A6NNN8 435 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 F8VP50 259 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 AP1G2O75843 785 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 FGF19O95750 216 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 CSH1P0DML2 217 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 CSH2P0DML3 217 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 ZNF18P17022 549 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 ADORA2BP29275 332 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 COPB1P53618 953 aaKnown RBP17.86■□□□□ 0.45
LTBR-215ENST00000546296 TPM4P67936 248 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 TMEM270Q6UE05 265 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms