RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 MED15Q96RN5 788 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 GANQ9H2C0 597 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ARPP19P56211 112 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 PTK6Q13882 451 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 MTFR1Q15390 333 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 KCNT1Q5JUK3 1230 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ATF7IP2Q5U623 682 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 DDI1Q8WTU0 396 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 CKAP2Q8WWK9 683 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 GMCL1Q96IK5 515 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 BAZ2BQ9UIF8 2168 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 MAN1A2O60476 641 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 IMPG1Q17R60 797 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 TSPAN17Q96FV3 270 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 CNBD2Q96M20 576 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 TAAR1Q96RJ0 339 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 DCDC2Q9UHG0 476 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 SNUPNO95149 360 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 NUDT17P0C025 328 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 MAPTP10636 758 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 EFHC1Q5JVL4 640 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 IRF2BP1Q8IU81 584 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 AGAP11Q8TF27 550 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 GPRASP2Q96D09 838 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ELMO2Q96JJ3 720 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ILKAPQ9H0C8 392 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ADNPQ9H2P0 1102 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 CCDC78A2IDD5 438 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 THRAP10827 490 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 GFAPP14136 432 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 FDFT1P37268 417 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 TMPRSS6Q8IU80 811 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 JADE3Q92613 823 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 INPP5DQ92835 1189 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ULK4Q96C45 1275 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 KLHL4Q9C0H6 718 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 SP110Q9HB58 689 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 SAR1AQ9NR31 198 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ARHGEF38Q9NXL2 777 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 DNAJC16Q9Y2G8 782 aa12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-204ENST00000546276 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 RPS6P62753 249 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 ACTL9Q8TC94 416 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 TCP10LQ8TDR4 215 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 CYGBQ8WWM9 190 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 C16orf96A6NNT2 1141 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 CBX6O95503 412 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 LSM8O95777 96 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 ICAM1P05362 532 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 APOA4P06727 396 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 PECAM1P16284 738 aaPredicted RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 DRG2P55039 364 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 TSPY1Q01534 308 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 CCNJLQ8IV13 435 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 ABRAQ8N0Z2 381 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 SCFD2Q8WU76 684 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM49BQ9NUQ9 324 aa12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 SCHIP1Q9P0W5 487 aaPredicted RBP12.71□□□□□ -0.38
NPC1L1-204ENST00000546276 UBA6A0AVT1 1052 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 FCHO1O14526 889 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 ZBTB39O15060 712 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 SERPINB10P48595 397 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 NFIAQ12857 509 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 ADRM1Q16186 407 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 SCN4BQ8IWT1 228 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 APBB2Q92870 758 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 CAAP1Q9H8G2 361 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 MOCS2O96007 188 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 HADHAP40939 763 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 GOLGA7BQ2TAP0 167 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 CBWD6Q4V339 395 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 CBWD3Q5JTY5 395 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 CBWD5Q5RIA9 395 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 IER5Q5VY09 327 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF75CPQ92670 426 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms