RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 UXTQ9UBK9 157 aaPredicted RBP16.78■□□□□ 0.28
CCDC78-216ENST00000544996 ZMYM5Q9UJ78 669 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 MAGED2Q9UNF1 606 aaPredicted RBP16.78■□□□□ 0.28
CCDC78-216ENST00000544996 TRIM49BA6NDI0 452 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 PDGFBP01127 241 aaPredicted RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 CD44P16070 742 aaKnown RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 TRIM21P19474 475 aaKnown RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 RFX1P22670 979 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 BDNFP23560 247 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 ANXA13P27216 316 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 GRIK1P39086 918 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 GPR15P49685 360 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 GPC5P78333 572 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 PFKPQ01813 784 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 GPR158Q5T848 1215 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 SCARA5Q6ZMJ2 495 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 ZC3H3Q8IXZ2 948 aaKnown RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 B3GALNT2Q8NCR0 500 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 CEP295NLQ96MC4 621 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 DNAI2Q9GZS0 605 aa16.77■□□□□ 0.28
CCDC78-216ENST00000544996 METTL14Q9HCE5 456 aaKnown RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
CCDC78-216ENST00000544996 PPP1R3GB7ZBB8 358 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 NRG2O14511 850 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-216ENST00000544996 TRIM66O15016 1216 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 HMGA1P17096 107 aaKnown RBP16.76■□□□□ 0.27
CCDC78-216ENST00000544996 BMP6P22004 513 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 RAP1GAPP47736 663 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 MXI1P50539 228 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
CCDC78-216ENST00000544996 DCAF17Q5H9S7 520 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-216ENST00000544996 SDHAF4Q5VUM1 108 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 FOXR2Q6PJQ5 311 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 POTEHQ6S545 545 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 FBXL13Q8NEE6 735 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 FLCNQ8NFG4 579 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 ELMO3Q96BJ8 720 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 SHDQ96IW2 340 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 CEP63Q96MT8 703 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 TRMT61BQ9BVS5 477 aaKnown RBP16.76■□□□□ 0.27
CCDC78-216ENST00000544996 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 DPEP3Q9H4B8 488 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 TASP1Q9H6P5 420 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 TRPV4Q9HBA0 871 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 IL21Q9HBE4 155 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 EHD2Q9NZN4 543 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 KIAA1468Q9P260 1216 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 CA14Q9ULX7 337 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 TECTAO75443 2155 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 MYO10Q9HD67 2058 aa16.76■□□□□ 0.27
CCDC78-216ENST00000544996 ATP8B3O60423 1300 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 DOCK8Q8NF50 2099 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 SLC38A8A6NNN8 435 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 STK25O00506 426 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 NOL4O94818 638 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 PSMC3P17980 439 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 FCARP24071 287 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 AVPR2P30518 371 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 CLCN5P51795 746 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 NLRP12P59046 1061 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 WDR44Q5JSH3 913 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 STXBP5Q5T5C0 1151 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 ASTLQ6HA08 431 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-216ENST00000544996 SPOPLQ6IQ16 392 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 UNC93AQ86WB7 457 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 TRMT2BQ96GJ1 504 aaKnown RBP16.75■□□□□ 0.27
CCDC78-216ENST00000544996 SPATA17Q96L03 361 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 MYRFLQ96LU7 910 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 PLA2G2FQ9BZM2 168 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 SDCBP2Q9H190 292 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 KCNH6Q9H252 994 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 CYP3A43Q9HB55 503 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC78-216ENST00000544996 ARHGEF3Q9NR81 526 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 RAPGEFL1Q9UHV5 662 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 CTNND2Q9UQB3 1225 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 ARIH1Q9Y4X5 557 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-216ENST00000544996 NME7Q9Y5B8 376 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 DOCK6Q96HP0 2047 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 NOTCH4Q99466 2003 aa16.75■□□□□ 0.27
CCDC78-216ENST00000544996 SOBPA7XYQ1 873 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 DPYSL4O14531 572 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 DDX6P26196 483 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC78-216ENST00000544996 VIPR2P41587 438 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 ASPAP45381 313 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 CYP4F8P98187 520 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 PAK1Q13153 545 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 TTI2Q6NXR4 508 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 FRMD5Q7Z6J6 570 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 FILIP1Q7Z7B0 1213 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 ARID3BQ8IVW6 561 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms