RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 AMHP03971 560 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 ADORA2BP29275 332 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 PEX26Q7Z412 305 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 RTP3Q9BQQ7 232 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 COLEC11Q9BWP8 271 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 CRTAC1Q9NQ79 661 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 SNX12Q9UMY4 172 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 GABRB2P47870 512 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 SLC11A1P49279 550 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 BCAT1P54687 386 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 CYP4A22Q5TCH4 519 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 NT5DC3Q86UY8 548 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 SLC35F5Q8WV83 523 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 ACBD6Q9BR61 282 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 IL23AQ9NPF7 189 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 HCSTQ9UBK5 93 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 FAN1Q9Y2M0 1017 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 TCRBV5S1A1TA0A578 114 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 ACRP10323 421 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 PRLRP16471 622 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 GSCP56915 257 aaPredicted RBP32.17■■■□□ 2.74
CCM2-219ENST00000544363 BST2Q10589 180 aaKnown RBP32.17■■■□□ 2.74
CCM2-219ENST00000544363 MDH1BQ5I0G3 518 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 OVOS1Q6IE37 1185 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 SYNCQ9H7C4 482 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 PRKAG2Q9UGJ0 569 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 ANAPC7Q9UJX3 599 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 ADAM28Q9UKQ2 775 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 AMFRQ9UKV5 643 aa32.17■■■□□ 2.74
CCM2-219ENST00000544363 ERBB2P04626 1255 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 TKTP29401 623 aaKnown RBP32.16■■■□□ 2.74
CCM2-219ENST00000544363 PDE4CQ08493 712 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 MESDQ14696 234 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 DNAJC24Q6P3W2 148 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 FUKQ8N0W3 1084 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 THEM5Q8N1Q8 247 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 C3orf20Q8ND61 904 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 STK32AQ8WU08 396 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 BTBD6Q96KE9 485 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 WDR35Q9P2L0 1181 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 TJP2Q9UDY2 1190 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 HYOU1Q9Y4L1 999 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 ALG6Q9Y672 507 aa32.16■■■□□ 2.74
CCM2-219ENST00000544363 MKI67P46013 3256 aaKnown RBP32.16■■■□□ 2.74
CCM2-219ENST00000544363 BAIAP3O94812 1187 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 GALTP07902 379 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 WDR5P61964 334 aaKnown RBP32.15■■■□□ 2.74
CCM2-219ENST00000544363 ZNF268Q14587 947 aaPredicted RBP32.15■■■□□ 2.74
CCM2-219ENST00000544363 CCDC142Q17RM4 750 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 FEZF2Q8TBJ5 459 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 IPO4Q8TEX9 1081 aaKnown RBP32.15■■■□□ 2.74
CCM2-219ENST00000544363 MIS12Q9H081 205 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 ST7Q9NRC1 585 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 PACSIN2Q9UNF0 486 aaPredicted RBP32.15■■■□□ 2.74
CCM2-219ENST00000544363 DEFB103AP81534 67 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 RPS6KA1Q15418 735 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 PMF1Q6P1K2 205 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 XYLT1Q86Y38 959 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 MYCBPAPQ8TBZ2 947 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 SLC4A5Q9BY07 1137 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 MARCH5Q9NX47 278 aa32.15■■■□□ 2.74
CCM2-219ENST00000544363 ALPK3Q96L96 1907 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 MYBPHLA2RUH7 354 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 TMEM110-MUSTN1A8MSY1 372 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 TULP2O00295 520 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 CAPN15O75808 1086 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 TCP1P17987 556 aaKnown RBP32.14■■■□□ 2.74
CCM2-219ENST00000544363 PLCB3Q01970 1234 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 YWHAHQ04917 246 aaPredicted RBP32.14■■■□□ 2.74
CCM2-219ENST00000544363 PAQR9Q6ZVX9 377 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 OSBPL9Q96SU4 736 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 B3GNT5Q9BYG0 378 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 PCDH10Q9P2E7 1040 aa32.14■■■□□ 2.74
CCM2-219ENST00000544363 MYO1FO00160 1098 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 SYN3O14994 580 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 SRGAP2O75044 1071 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 TAP1Q03518 808 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 PTPROQ16827 1216 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 INTS6LQ5JSJ4 861 aaKnown RBP32.13■■■□□ 2.73
CCM2-219ENST00000544363 PPP1R15BQ5SWA1 713 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 UBE2Q2Q8WVN8 375 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 DUSP16Q9BY84 665 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 TRIM7Q9C029 511 aa32.13■■■□□ 2.73
CCM2-219ENST00000544363 CLDN5O00501 218 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 GJB6O95452 261 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 RGS7P49802 495 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 BCAR1P56945 870 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 PPIGQ13427 754 aaKnown RBP eCLIP32.12■■■□□ 2.73
CCM2-219ENST00000544363 FAM171BQ6P995 826 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 TMEM110Q86TL2 294 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 ZNF689Q96CS4 500 aaPredicted RBP32.12■■■□□ 2.73
CCM2-219ENST00000544363 MCRS1Q96EZ8 462 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 HES6Q96HZ4 224 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 MED10Q9BTT4 135 aa32.12■■■□□ 2.73
CCM2-219ENST00000544363 TMEM191CA6NGB0 347 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 E5RJQ4 531 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 OAZ2O95190 189 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 SNX16P57768 344 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 WHAMMP3Q1A5X7 153 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 OR10T2Q8NGX3 314 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms