RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 TNRC6BQ9UPQ9 1833 aaKnown RBP16.68■□□□□ 0.26
CD4-212ENST00000544344 K7ENM7 598 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 NOL4O94818 638 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 CSH1P0DML2 217 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 CSH2P0DML3 217 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 CEACAM1P13688 526 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 BCKDHBP21953 392 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 SCP2P22307 547 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 GBP1P32455 592 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 DGKEP52429 567 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 USP4Q13107 963 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 EFCAB13Q8IY85 973 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 DCP1BQ8IZD4 617 aaKnown RBP16.68■□□□□ 0.26
CD4-212ENST00000544344 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 TRMT2BQ96GJ1 504 aaKnown RBP16.68■□□□□ 0.26
CD4-212ENST00000544344 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 TPSD1Q9BZJ3 242 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 TMEM9BQ9NQ34 198 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
CD4-212ENST00000544344 MAGED2Q9UNF1 606 aaPredicted RBP16.68■□□□□ 0.26
CD4-212ENST00000544344 STYXL1Q9Y6J8 313 aa16.68■□□□□ 0.26
CD4-212ENST00000544344 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
CD4-212ENST00000544344 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 KHNYNO15037 678 aaKnown RBP16.67■□□□□ 0.26
CD4-212ENST00000544344 TRAK2O60296 914 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
CD4-212ENST00000544344 CHRM1P11229 460 aaPredicted RBP16.67■□□□□ 0.26
CD4-212ENST00000544344 IRX4P78413 519 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 GTF2BQ00403 316 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 DDR2Q16832 855 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 GAB4Q2WGN9 574 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 SCARA3Q6AZY7 606 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 CRELD2Q6UXH1 353 aaPredicted RBP16.67■□□□□ 0.26
CD4-212ENST00000544344 MYCT1Q8N699 235 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 TSTD1Q8NFU3 115 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 USP33Q8TEY7 942 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
CD4-212ENST00000544344 SCNM1Q9BWG6 230 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 IKZF4Q9H2S9 585 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 LINC00597Q9H2U6 94 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 TMEM206Q9H813 350 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 BLOC1S4Q9NUP1 217 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 PCNX2A6NKB5 2137 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 CACNA1EQ15878 2313 aa16.67■□□□□ 0.26
CD4-212ENST00000544344 NBEAQ8NFP9 2946 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 TMEM8BA6NDV4 472 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 SRRM3A6NNA2 597 aaPredicted RBP16.66■□□□□ 0.26
CD4-212ENST00000544344 K7EQS6 105 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 SEC24BO95487 1268 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 HNRNPLP14866 589 aaKnown RBP eCLIP16.66■□□□□ 0.26
CD4-212ENST00000544344 CYP2F1P24903 491 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 OPRD1P41143 372 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 WNT7BP56706 349 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 PSMD2Q13200 908 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 NFE2Q16621 373 aaPredicted RBP16.66■□□□□ 0.26
CD4-212ENST00000544344 CCDC142Q17RM4 750 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 ZC2HC1CQ53FD0 456 aaPredicted RBP16.66■□□□□ 0.26
CD4-212ENST00000544344 USP39Q53GS9 565 aaKnown RBP16.66■□□□□ 0.26
CD4-212ENST00000544344 GPBP1Q86WP2 473 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 ATP2A3Q93084 1043 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 CNOT6LQ96LI5 555 aaKnown RBP16.66■□□□□ 0.26
CD4-212ENST00000544344 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
CD4-212ENST00000544344 ANKRD11Q6UB99 2663 aaPredicted RBP16.65■□□□□ 0.26
CD4-212ENST00000544344 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 FAM13AO94988 1023 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 IFNAR2P48551 515 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 ZXDBP98169 803 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 SV2CQ496J9 727 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 ADALQ6DHV7 355 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 ANO7Q6IWH7 933 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 C11orf74Q86VG3 221 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 ARL14EPQ8N8R7 260 aaPredicted RBP16.65■□□□□ 0.26
CD4-212ENST00000544344 MDGA1Q8NFP4 955 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 OLIG1Q8TAK6 271 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 SH3RF2Q8TEC5 729 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 EXOC4Q96A65 974 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 CDK5RAP3Q96JB5 506 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 TRPC7Q9HCX4 862 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 UXTQ9UBK9 157 aaPredicted RBP16.65■□□□□ 0.26
CD4-212ENST00000544344 L1RE1Q9UN81 338 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 GON4LQ3T8J9 2241 aa16.65■□□□□ 0.26
CD4-212ENST00000544344 PI4KAP42356 2102 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 CKMP06732 381 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 USP17L7P0C7H9 530 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 TCF3P15923 654 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 ACAT1P24752 427 aaKnown RBP16.64■□□□□ 0.25
CD4-212ENST00000544344 ADSSP30520 456 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 RPL10AP62906 217 aaKnown RBP16.64■□□□□ 0.25
CD4-212ENST00000544344 TSPY1Q01534 308 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
CD4-212ENST00000544344 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
CD4-212ENST00000544344 C2orf27AQ580R0 203 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 RILPL1Q5EBL4 403 aa16.64■□□□□ 0.25
CD4-212ENST00000544344 INTS6LQ5JSJ4 861 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms