RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 LRG1P02750 347 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PAEPP09466 180 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 BDNFP23560 247 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ADORA2BP29275 332 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TUFMP49411 452 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SGO2Q562F6 1265 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TCEAL8Q8IYN2 117 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SLC2A14Q8TDB8 520 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CYFIP2Q96F07 1278 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FUBP3Q96I24 572 aaKnown RBP eCLIP15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 NUP58Q9BVL2 599 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 B3GNT5Q9BYG0 378 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 RHOBTB2Q9BYZ6 727 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HSFX1Q9UBD0 423 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CNTN6Q9UQ52 1028 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PTPRDP23468 1912 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 F8VZ95 297 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 AP5Z1O43299 807 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TBX10O75333 385 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PNMA6AP0CW24 399 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 VDRP11473 427 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CYP2F1P24903 491 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GRIK1P39086 918 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PBX1P40424 430 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ALDH1A3P47895 512 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZNF132P52740 706 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CTC1Q2NKJ3 1217 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CFAP221Q4G0U5 840 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PPP1R26Q5T8A7 1209 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ANKRD54Q6NXT1 300 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SCN4BQ8IWT1 228 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 APOL5Q9BWW9 433 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GPR88Q9GZN0 384 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CRISPLD1Q9H336 500 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SFXN1Q9H9B4 322 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ABCB6Q9NP58 842 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 KIAA1257Q9ULG3 409 aa15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CYP26A1O43174 497 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 RFPL2O75678 378 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZMYND10O75800 440 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SOAT2O75908 522 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HAPLN1P10915 354 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PTK2Q05397 1052 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 DLX2Q07687 328 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TWF1Q12792 350 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 RTL10Q7L3V2 364 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FAM35AQ86V20 835 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FAM71AQ8IYT1 594 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FUKQ8N0W3 1084 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 C12orf76Q8N812 135 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SMARCD1Q96GM5 515 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HNRNPABQ99729 332 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 KRT82Q9NSB4 513 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZDHHC7Q9NXF8 308 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 YIPF1Q9Y548 306 aa15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.37■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CCDC195A0A1B0GUA6 201 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CCL16O15467 120 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CALCAP01258 141 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FAM200BP0CF97 657 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HOXB8P17481 243 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 BRD2P25440 801 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ANXA13P27216 316 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GNA15P30679 374 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SOX5P35711 763 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 LTBRP36941 435 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 STAT1P42224 750 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 JAM2P57087 298 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 RPL10AP62906 217 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PLD1Q13393 1074 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 COL19A1Q14993 1142 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 RARS2Q5T160 578 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SPECC1LQ69YQ0 1117 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 VSTM1Q6UX27 236 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ELMOD1Q8N336 334 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HLA-CQ95604 372 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 UBE2ZQ9H832 354 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PIDD1Q9HB75 910 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ACP6Q9NPH0 428 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CLEC1BQ9P126 229 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ITIH6Q6UXX5 1313 aa15.36■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TRIM66O15016 1216 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 THAP12O43422 761 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 MED7O43513 233 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 AP1G2O75843 785 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GFPT2O94808 682 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HNRNPA1P09651 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 KCNA5P22460 613 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HOXA9P31269 272 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 MAGEA11P43364 429 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GPR15P49685 360 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 EPHB3P54753 998 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 BPIFB4P59827 614 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 VEPH1Q14D04 833 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CLUL1Q15846 466 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 DDR2Q16832 855 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GOLGA7BQ2TAP0 167 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms