RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 DEFB118Q96PH6 123 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 DNAI2Q9GZS0 605 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 STIM2Q9P246 746 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.94■□□□□ 0.94
COPS7A-218ENST00000543939 C9IYK1 514 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 GABRDO14764 452 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 SELPP16109 830 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 HSPA6P17066 643 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 RFC1P35251 1148 aaPredicted RBP20.93■□□□□ 0.94
COPS7A-218ENST00000543939 GRIK3Q13003 919 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 UPP1Q16831 310 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 WSCD1Q658N2 575 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 LRRC8DQ7L1W4 858 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 C3orf58Q8NDZ4 430 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 JOSD2Q8TAC2 188 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 FNIP1Q8TF40 1166 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 SLC35F5Q8WV83 523 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 LINC01599Q8WXQ3 324 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 SLC4A5Q9BY07 1137 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 MIS12Q9H081 205 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 DDX47Q9H0S4 455 aaKnown RBP20.93■□□□□ 0.94
COPS7A-218ENST00000543939 HESX1Q9UBX0 185 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 OGDHLQ9ULD0 1010 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 USTQ9Y2C2 406 aa20.93■□□□□ 0.94
COPS7A-218ENST00000543939 SART1O43290 800 aaKnown RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 RAD51CO43502 376 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 POMCP01189 267 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 BEND6Q5SZJ8 279 aaPredicted RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 PMF1Q6P1K2 205 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 CCNI2Q6ZMN8 369 aaPredicted RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 SLC13A5Q86YT5 568 aaPredicted RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 TNIP3Q96KP6 325 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 PLVAPQ9BX97 442 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 SLITRK6Q9H5Y7 841 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 ST7Q9NRC1 585 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 METTL5Q9NRN9 209 aaKnown RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 CASTOR2A6NHX0 329 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 E5RJQ4 531 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 F8VP50 259 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 TULP2O00295 520 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 MYCP01106 439 aaPredicted RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 CCL5P13501 91 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 CCDC130P13994 396 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 IBSPP21815 317 aaPredicted RBP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 AARSP49588 968 aaKnown RBP eCLIP20.92■□□□□ 0.94
COPS7A-218ENST00000543939 FAM189BP81408 668 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 PPP2R5EQ16537 467 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 SLC24A5Q71RS6 500 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 KATNAL2Q8IYT4 538 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 ANKRD52Q8NB46 1076 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 STK32AQ8WU08 396 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 PAAF1Q9BRP4 392 aa20.92■□□□□ 0.94
COPS7A-218ENST00000543939 GOLGA6L10A0A0M3HER8 536 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 EOMESO95936 686 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 GLI1P08151 1106 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 PDE4CQ08493 712 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 BFSP2Q13515 415 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 LRRC38Q5VT99 294 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 ADAT2Q7Z6V5 191 aaKnown RBP20.91■□□□□ 0.94
COPS7A-218ENST00000543939 TMEM110Q86TL2 294 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 ZDHHC14Q8IZN3 488 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 TMEM86AQ8N2M4 240 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 B3GALNT2Q8NCR0 500 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 RNF208Q9H0X6 261 aa20.91■□□□□ 0.94
COPS7A-218ENST00000543939 TSC2P49815 1807 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 HEXIM1O94992 359 aaKnown RBP20.9■□□□□ 0.94
COPS7A-218ENST00000543939 TNFRSF8P28908 595 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 RGS7P49802 495 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 BCAT1P54687 386 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 BST2Q10589 180 aaKnown RBP20.9■□□□□ 0.94
COPS7A-218ENST00000543939 TUSC3Q13454 348 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 FAM183BPQ6ZVS7 135 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 HINFPQ9BQA5 517 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 GDF3Q9NR23 364 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 INPP5FQ9Y2H2 1132 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 FSCN2O14926 492 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 ATP8B1O43520 1251 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 GABBR2O75899 941 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 TCF4P15884 667 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 PSMA2P25787 234 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 ADORA2BP29275 332 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 SSR1P43307 286 aaKnown RBP20.9■□□□□ 0.94
COPS7A-218ENST00000543939 GPNMBQ14956 572 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 SIX1Q15475 284 aaPredicted RBP20.9■□□□□ 0.94
COPS7A-218ENST00000543939 OR6B2Q6IFH4 312 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 DSTYKQ6XUX3 929 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 PRELID2Q8N945 189 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 UROC1Q96N76 676 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 FTHL17Q9BXU8 183 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 WBP1LQ9NX94 342 aa20.9■□□□□ 0.94
COPS7A-218ENST00000543939 TCRBV7S2A1N4TA0A589 114 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 NBNO60934 754 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 ATP2C2O75185 946 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 MYBL2P10244 700 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 PTPN1P18031 435 aaKnown RBP20.89■□□□□ 0.93
COPS7A-218ENST00000543939 TKTP29401 623 aaKnown RBP20.89■□□□□ 0.93
COPS7A-218ENST00000543939 LHX1P48742 406 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 RPL34P49207 117 aaKnown RBP20.89■□□□□ 0.93
COPS7A-218ENST00000543939 TIGD5Q53EQ6 642 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 FAM102AQ5T9C2 384 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms