RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 LRCH4O75427 683 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 KIAA0754O94854 1291 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 P4HA1P13674 534 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 XYLT1Q86Y38 959 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 FOXP3Q9BZS1 431 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 DRG1Q9Y295 367 aaKnown RBP14.66□□□□□ -0.06
MSH2-206ENST00000543555 PLXNA1Q9UIW2 1896 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 H3BRB1 525 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 MICAL2O94851 1124 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 ERBB2P04626 1255 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 VCPP55072 806 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 TMEM132DQ14C87 1099 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 OASLQ15646 514 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 EXOC3L1Q86VI1 746 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 ZCCHC9Q8N567 271 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 ARFGAP1Q8N6T3 406 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 NLRP7Q8WX94 980 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 CHMP6Q96FZ7 201 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 TUT1Q9H6E5 874 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 SYNCQ9H7C4 482 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 DDX20Q9UHI6 824 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.65□□□□□ -0.06
MSH2-206ENST00000543555 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 C3orf70A6NLC5 250 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 DNALI1O14645 258 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 TSPAN1O60635 241 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 TCEA3O75764 348 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 ARSEP51690 589 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 ZNF268Q14587 947 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 TAF1CQ15572 869 aaPredicted RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 CCDC38Q502W7 563 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 CEP128Q6ZU80 1094 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 YTHDF3Q7Z739 585 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 TADA2BQ86TJ2 420 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 KIAA0319LQ8IZA0 1049 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 PPM1EQ8WY54 764 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 HAUS1Q96CS2 278 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 HPDLQ96IR7 371 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 METTL5Q9NRN9 209 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 INTS9Q9NV88 658 aaKnown RBP14.65□□□□□ -0.06
MSH2-206ENST00000543555 AGAP1Q9UPQ3 857 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 TLL2Q9Y6L7 1015 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 PLXNB2O15031 1838 aa14.65□□□□□ -0.06
MSH2-206ENST00000543555 FAM155AB1AL88 458 aaPredicted RBP14.64□□□□□ -0.07
MSH2-206ENST00000543555 SNAI1O95863 264 aaPredicted RBP14.64□□□□□ -0.07
MSH2-206ENST00000543555 KRT7P08729 469 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 ZSCAN5DPP0CG00 497 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 DRD4P21917 467 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 C6orf89Q6UWU4 347 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 EMC1Q8N766 993 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 ZWILCHQ9H900 591 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 EFR3BQ9Y2G0 817 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 SLC45A1Q9Y2W3 748 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 C2CD2Q9Y426 696 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 STRNO43815 780 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 ITGAVP06756 1048 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 VDRP11473 427 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 IL1R2P27930 398 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 ATP5DP30049 168 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 HADHQ16836 314 aaKnown RBP14.64□□□□□ -0.07
MSH2-206ENST00000543555 SMTNL2Q2TAL5 461 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 CPLX4Q7Z7G2 160 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 OTUD6BQ8N6M0 293 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 ARHGEF2Q92974 986 aaKnown RBP14.64□□□□□ -0.07
MSH2-206ENST00000543555 ZNF317Q96PQ6 595 aaPredicted RBP14.64□□□□□ -0.07
MSH2-206ENST00000543555 RBM15Q96T37 977 aaKnown RBP eCLIP14.64□□□□□ -0.073e-8■■■■□ 21.3
MSH2-206ENST00000543555 ITGA11Q9UKX5 1188 aa14.64□□□□□ -0.07
MSH2-206ENST00000543555 M0QYV0 167 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 ETS1P14921 441 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 GABRB2P47870 512 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 GRIK4Q16099 956 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 CNGA2Q16280 664 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 C9orf72Q96LT7 481 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 ACAP3Q96P50 834 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 CCDC134Q9H6E4 229 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 CTNNAL1Q9UBT7 734 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 MORF4L1Q9UBU8 362 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 HMGCRP04035 888 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 GPD2P43304 727 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 INCA1Q0VD86 236 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 GPS1Q13098 491 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 KCNT1Q5JUK3 1230 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 MARCH8Q5T0T0 291 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 SLC35B2Q8TB61 432 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 MCRS1Q96EZ8 462 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 SEC16BQ96JE7 1060 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 HEXIM2Q96MH2 286 aaKnown RBP14.63□□□□□ -0.07
MSH2-206ENST00000543555 ADPGKQ9BRR6 497 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 DPP3Q9NY33 737 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 TPX2Q9ULW0 747 aaKnown RBP14.63□□□□□ -0.07
MSH2-206ENST00000543555 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
MSH2-206ENST00000543555 STAU1O95793 577 aaKnown RBP14.63□□□□□ -0.07
MSH2-206ENST00000543555 MAGEA4P43358 317 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 LIG3P49916 1009 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 RBP5P82980 135 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 IFT88Q13099 833 aa14.63□□□□□ -0.07
MSH2-206ENST00000543555 GKAP1Q5VSY0 366 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms