RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PTPN21Q16825 1174 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CCDC142Q17RM4 750 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CTC1Q2NKJ3 1217 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 SGO2Q562F6 1265 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 ATAT1Q5SQI0 421 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 KLHDC7AQ5VTJ3 777 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 FAM171BQ6P995 826 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 LILRA6Q6PI73 481 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 TMEM184AQ6ZMB5 413 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 ITIH5Q86UX2 942 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 TCEAL8Q8IYN2 117 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 C12orf29Q8N999 325 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 SLC2A14Q8TDB8 520 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 GIPC2Q8TF65 315 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 JAKMIP2Q96AA8 810 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CYFIP2Q96F07 1278 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 PCED1BQ96HM7 432 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 FUBP3Q96I24 572 aaKnown RBP eCLIP6.71□□□□□ -1.34
LTBR-212ENST00000543542 RIPOR3Q96MK2 946 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 NAP1L5Q96NT1 182 aaPredicted RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 TWNKQ96RR1 684 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CORO1BQ9BR76 489 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 B3GNT5Q9BYG0 378 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 RHOBTB2Q9BYZ6 727 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 PRKD2Q9BZL6 878 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 ELOVL4Q9GZR5 314 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 HSD3B7Q9H2F3 369 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 FAM124BQ9H5Z6 455 aaPredicted RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 NLRC4Q9NPP4 1024 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CRTAC1Q9NQ79 661 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 RTN4Q9NQC3 1192 aaKnown RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 PRDM6Q9NQX0 595 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CLEC1BQ9P126 229 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 MAGED2Q9UNF1 606 aaPredicted RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 YIPF1Q9Y548 306 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 FHOD1Q9Y613 1164 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CDH23Q9H251 3354 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 PRRC2BQ5JSZ5 2229 aaKnown RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 A0A1B0GTH6 734 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 LRRC10BA6NIK2 292 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 THAP12O43422 761 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PAEPP09466 180 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 TPM1P09493 284 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 MYL4P12829 197 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 UCHL3P15374 230 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PTPN2P17706 415 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 GNA15P30679 374 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 HOXA9P31269 272 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 LTBRP36941 435 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 STAT1P42224 750 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 MAGEA11P43364 429 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 GPR15P49685 360 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 RAD23BP54727 409 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 MAP3K7CLP57077 242 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 BPIFB4P59827 614 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 TFF2Q03403 129 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PTK2Q05397 1052 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 SMAD4Q13485 552 aaKnown RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 KCNC3Q14003 757 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 DRAP1Q14919 205 aaPredicted RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 DDR2Q16832 855 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 GOLGA7BQ2TAP0 167 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PUS10Q3MIT2 529 aaKnown RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 CFAP221Q4G0U5 840 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PPP1R26Q5T8A7 1209 aaPredicted RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 CYP4A22Q5TCH4 519 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 SDHAF4Q5VUM1 108 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PTCRAQ6ISU1 281 aaPredicted RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 SYCE2Q6PIF2 218 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 VSTM1Q6UX27 236 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PDZD4Q76G19 769 aaPredicted RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 RTL10Q7L3V2 364 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 GRASPQ7Z6J2 395 aaPredicted RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 GPR149Q86SP6 731 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 FAM35AQ86V20 835 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 CRYBG2Q8N1P7 616 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 TTC9BQ8N6N2 239 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 SLC4A11Q8NBS3 891 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 GPR152Q8TDT2 470 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 WHAMMQ8TF30 809 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 SMARCD1Q96GM5 515 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 KREMEN1Q96MU8 473 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 GCNAQ96QF7 691 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 ERGIC2Q96RQ1 377 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 TRIM5Q9C035 493 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 ZNF518BQ9C0D4 1074 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 XPO4Q9C0E2 1151 aaKnown RBP6.7□□□□□ -1.34
LTBR-212ENST00000543542 RBSNQ9H1K0 784 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 ADAM7Q9H2U9 754 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 CRISPLD1Q9H336 500 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 ABCB6Q9NP58 842 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 SIX2Q9NPC8 291 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 PLCB1Q9NQ66 1216 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 ASAH2Q9NR71 780 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 KRT82Q9NSB4 513 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 EHD2Q9NZN4 543 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 HSFX1Q9UBD0 423 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 KIAA1257Q9ULG3 409 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 DAAM1Q9Y4D1 1078 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms