RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 ATXN3P54252 364 aaPredicted RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 SEMG2Q02383 582 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 SLC14A1Q13336 389 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 TUSC3Q13454 348 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 PPP2R5AQ15172 486 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 TMEM119Q4V9L6 283 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 RILPL1Q5EBL4 403 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 NT5DC1Q5TFE4 455 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 FUT10Q6P4F1 479 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 C1orf228Q6PIY5 440 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 CD300LGQ6UXG3 332 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 ALKAL1Q6UXT8 129 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 C1orf186Q6ZWK4 172 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 ZNF771Q7L3S4 317 aaPredicted RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 C11orf74Q86VG3 221 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 ZBTB8OSQ8IWT0 167 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 MMP21Q8N119 569 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 ZNF397Q8NF99 534 aaPredicted RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 KIFAP3Q92845 792 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 PPP1R10Q96QC0 940 aaKnown RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 NTPCRQ9BSD7 190 aaKnown RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 KIFC3Q9BVG8 833 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 RUSC1Q9BVN2 902 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 GBP3Q9H0R5 595 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 BHMT2Q9H2M3 363 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 CPNE5Q9HCH3 593 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 MRPL17Q9NRX2 175 aaKnown RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 STARD5Q9NSY2 213 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 DDX19AQ9NUU7 478 aaKnown RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 DNAAF2Q9NVR5 837 aaKnown RBP6.99□□□□□ -1.29
CIT-213ENST00000543324 CACNG4Q9UBN1 327 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 LRWD1Q9UFC0 647 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 ADAM28Q9UKQ2 775 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 PYCARDQ9ULZ3 195 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 TNFSF13BQ9Y275 285 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 PTPRDP23468 1912 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 MED13Q9UHV7 2174 aa6.99□□□□□ -1.29
CIT-213ENST00000543324 E9PMD0 336 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SLC26A4O43511 780 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 KIF4AO95239 1232 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SSBP05455 408 aaKnown RBP eCLIP6.98□□□□□ -1.29
CIT-213ENST00000543324 URODP06132 367 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 POU2F2P09086 479 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SPATA31D3P0C874 917 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 FCARP24071 287 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 NPTX2P47972 431 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SLC12A3P55017 1021 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 UCNP55089 124 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 PRPF4BQ13523 1007 aaKnown RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 GRM2Q14416 872 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 TERF2Q15554 542 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SMAD1Q15797 465 aaKnown RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 DCAF4L1Q3SXM0 396 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 RTP2Q5QGT7 225 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 ARL6IP4Q66PJ3 421 aaKnown RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 ZNF787Q6DD87 383 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 TANGO2Q6ICL3 276 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 RINT1Q6NUQ1 792 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 RBM43Q6ZSC3 357 aaKnown RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 SPATA31D4Q6ZUB0 917 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 HACE1Q8IYU2 909 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 KRT222Q8N1A0 295 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 MINDY1Q8N5J2 469 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 KIF18AQ8NI77 898 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 FAM200AQ8TCP9 573 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 TSC1Q92574 1164 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 TIGD1Q96MW7 591 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 ZNF830Q96NB3 372 aaPredicted RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 PNMA5Q96PV4 448 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 ACO2Q99798 780 aaKnown RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 TIPINQ9BVW5 301 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 GTPBP2Q9BX10 602 aaKnown RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 CDT1Q9H211 546 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 TMEM134Q9H6X4 195 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 C17orf75Q9HAS0 396 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 FSCN3Q9NQT6 498 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.98□□□□□ -1.29
CIT-213ENST00000543324 TMEM74BQ9NUR3 256 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SLC8A2Q9UPR5 921 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SSX2IPQ9Y2D8 614 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 USP20Q9Y2K6 914 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 PRG3Q9Y2Y8 225 aaPredicted RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.98□□□□□ -1.29
CIT-213ENST00000543324 GON4LQ3T8J9 2241 aa6.98□□□□□ -1.29
CIT-213ENST00000543324 SF3B1O75533 1304 aaKnown RBP eCLIP6.98□□□□□ -1.29
CIT-213ENST00000543324 ARNTLO00327 626 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 TGM5O43548 720 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 FAM189A1O60320 539 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 HIP1RO75146 1068 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 GJB3O75712 270 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 F13A1P00488 732 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 FGFR3P22607 806 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 IGFBP6P24592 240 aaPredicted RBP6.97□□□□□ -1.29
CIT-213ENST00000543324 GJB2P29033 226 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 CDC25AP30304 524 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 HOXA9P31269 272 aa6.97□□□□□ -1.29
CIT-213ENST00000543324 GRM5P41594 1212 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms