RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	PIGH	Q14442	188 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	RCN1	Q15293	331 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	ZBTB41	Q5SVQ8	909 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	TMEM154	Q6P9G4	183 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	OR5B17	Q8NGF7	314 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	ACTL9	Q8TC94	416 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	DCAKD	Q8WVC6	231 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	MCUR1	Q96AQ8	359 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	PTCD3	Q96EY7	689 aa	Known RBP	13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	HAPLN2	Q9GZV7	340 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	SLC38A10	Q9HBR0	1119 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	CYP26B1	Q9NR63	512 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	GINM1	Q9NU53	330 aa		13.57	□□□□□ -0.24
DDX11-223	ENST00000542838	SPDYE5	A6NIY4	337 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	ABLIM1	O14639	778 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	LPXN	O60711	386 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	DKC1	O60832	514 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	MT-ND3	P03897	115 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	SERPINB3	P29508	390 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	DGKZ	Q13574	1117 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	MTERF2	Q49AM1	385 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	VPS52	Q8N1B4	723 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	NAT8L	Q8N9F0	302 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	RSAD2	Q8WXG1	361 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	SYT15	Q9BQS2	421 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	WDR83	Q9BRX9	315 aa	Known RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	TMEM120A	Q9BXJ8	343 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	ZNRF3	Q9ULT6	936 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	TELO2	Q9Y4R8	837 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	TCRBV5S1A1T	A0A578	114 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	WDR46	O15213	610 aa	Known RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	TBC1D12	O60347	775 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	KRT36	O76013	467 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	BRD2	P25440	801 aa	Known RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	PRKCE	Q02156	737 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	NCOA4	Q13772	614 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	KPNB1	Q14974	876 aa	Known RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	ZNF394	Q53GI3	561 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	SNX30	Q5VWJ9	437 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	SCARA3	Q6AZY7	606 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	PRR11	Q96HE9	360 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	CGRRF1	Q99675	332 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	ZWILCH	Q9H900	591 aa		13.56	□□□□□ -0.24
DDX11-223	ENST00000542838	TCRBV7S3A2	A0A539	114 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	PSAP	P07602	524 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	RPL22	P35268	128 aa	Known RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CDK16	Q00536	496 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SMTNL2	Q2TAL5	461 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	ACSBG2	Q5FVE4	666 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CYP4A22	Q5TCH4	519 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	RINL	Q6ZS11	566 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SCYL3	Q8IZE3	742 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	TTC17	Q96AE7	1141 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	MSTO1	Q9BUK6	570 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	MTO1	Q9Y2Z2	717 aa	Known RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	STYXL1	Q9Y6J8	313 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CST8	O60676	142 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	RXRB	P28702	533 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	LBR	Q14739	615 aa	Known RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SPDYE2	Q495Y8	402 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CCDC62	Q6P9F0	684 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	TMEM35B	Q8NCS4	154 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	IMPG2	Q9BZV3	1241 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	PHACTR1	Q9C0D0	580 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	KCNK13	Q9HB14	408 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	DOCK5	Q9H7D0	1870 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SMIM24	O75264	130 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	ESRRA	P11474	423 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	HARS	P12081	509 aa	Known RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CCND2	P30279	289 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	ABCD1	P33897	745 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SEZ6	Q53EL9	994 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	THEMIS2	Q5TEJ8	643 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	PDIK1L	Q8N165	341 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SCG3	Q8WXD2	468 aa	Known RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	TMEM143	Q96AN5	459 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	SKA1	Q96BD8	255 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	FAM111A	Q96PZ2	611 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	TSC22D3	Q99576	134 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	DLGAP2	Q9P1A6	1054 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	XPO7	Q9UIA9	1087 aa	Known RBP	13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	CHMP2B	Q9UQN3	213 aa		13.55	□□□□□ -0.24
DDX11-223	ENST00000542838	KIAA1217	Q5T5P2	1943 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	IQANK1	A0A1B0GTG1	560 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	C2orf71	A6NGG8	1288 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	LRRIQ4	A6NIV6	560 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	C3orf70	A6NLC5	250 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX11-223	ENST00000542838		E7ESA3	106 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	CAPN9	O14815	690 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	TMEM63A	O94886	807 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	PSMG1	O95456	288 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	LDHA	P00338	332 aa	Known RBP	13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	BGN	P21810	368 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	CHRNA5	P30532	468 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	ZNF132	P52740	706 aa		13.54	□□□□□ -0.24
DDX11-223	ENST00000542838	TAP1	Q03518	808 aa		13.54	□□□□□ -0.24

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