RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CCDC93Q567U6 631 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 TOR2AQ5JU69 321 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ANKRD45Q5TZF3 282 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ISM2Q6H9L7 571 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 KLHL10Q6JEL2 608 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ZSCAN25Q6NSZ9 544 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 FAM180AQ6UWF9 173 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 Q6YL49 198 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ZNF575Q86XF7 245 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 MFN1Q8IWA4 741 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CMTR2Q8IYT2 770 aaKnown RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 C17orf53Q8N3J3 647 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 AFAP1L2Q8N4X5 818 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 FAM71BQ8TC56 605 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 N4BP2L2Q92802 583 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 AGAP3Q96P47 875 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 OSBPL9Q96SU4 736 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 FUCA2Q9BTY2 467 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ACE2Q9BYF1 805 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 TOR3AQ9H497 397 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 BCO1Q9HAY6 547 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 DMRT3Q9NQL9 472 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 C14orf119Q9NWQ9 140 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ORC3Q9UBD5 711 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ABCF2Q9UG63 623 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ATP6V1DQ9Y5K8 247 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 MON2Q7Z3U7 1717 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CACNA1FO60840 1977 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 NPATQ14207 1427 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 ADGRF5Q8IZF2 1346 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CHD2O14647 1828 aaKnown RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 PTPRMP28827 1452 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 CRYBG1Q9Y4K1 1723 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 WNT10BO00744 389 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 AHCYL1O43865 530 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 LMNAP02545 664 aaKnown RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 HLA-DOAP06340 250 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SNRPA1P09661 255 aaKnown RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 MTHFD2P13995 350 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 DDX6P26196 483 aaKnown RBP eCLIP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 BMPR1AP36894 532 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 TMPOP42166 694 aaKnown RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 MTHFSP49914 203 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 PER3P56645 1201 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 UBE2HP62256 183 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SRSF2Q01130 221 aaKnown RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 GUCY1B3Q02153 619 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 DRP2Q13474 957 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 METRNLQ641Q3 311 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SARM1Q6SZW1 724 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 LHFPL2Q6ZUX7 228 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ZNF572Q7Z3I7 529 aaPredicted RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 KCNK18Q7Z418 384 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 CCDC170Q8IYT3 715 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SUPT20HQ8NEM7 779 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 STON2Q8WXE9 905 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SSH1Q8WYL5 1049 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SAAL1Q96ER3 474 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 NEU1Q99519 415 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 GREM2Q9H772 168 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ATP6V0A4Q9HBG4 840 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 RBM12Q9NTZ6 932 aaKnown RBP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SUN2Q9UH99 717 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ZNHIT2Q9UHR6 403 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ODF2LQ9ULJ1 636 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ZBTB21Q9ULJ3 1066 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.48□□□□□ -1.37
XRCC4-206ENST00000542685 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ARHGEF40Q8TER5 1519 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 ERCC6L2Q5T890 1561 aa6.48□□□□□ -1.37
XRCC4-206ENST00000542685 SETD1AO15047 1707 aaKnown RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 AKAP12Q02952 1782 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 GOLGA6CA6NDK9 693 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 GOLGA6BA6NDN3 693 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 GOLGA6L10A6NI86 522 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 MAP2K7O14733 419 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 POLR3GO15318 223 aaPredicted RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 PJA2O43164 708 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ERLIN1O75477 346 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 GOLGA6DP0CG33 693 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 EZRP15311 586 aaKnown RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ALOX15P16050 662 aaPredicted RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 YY1P25490 414 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 CNGA1P29973 690 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 SLC8A1P32418 973 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ADRA1BP35368 520 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ARHGAP25P42331 645 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TAP1Q03518 808 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 RESTQ13127 1097 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 IQCB1Q15051 598 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TAF7Q15545 349 aaPredicted RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ARHGAP29Q52LW3 1261 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TTC19Q6DKK2 380 aaPredicted RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 IQCA1Q86XH1 822 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 PLA2G4DQ86XP0 818 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ITPRIPQ8IWB1 547 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 PQLC1Q8N2U9 271 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TMEM57Q8N5G2 664 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 HDAC7Q8WUI4 952 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms