RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ZBTB45Q96K62 511 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 C9orf72Q96LT7 481 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 CFAP57Q96MR6 1250 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 TTC25Q96NG3 672 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 TGS1Q96RS0 853 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 RBM15Q96T37 977 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 PHACTR1Q9C0D0 580 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ECT2Q9H8V3 914 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 PPCSQ9HAB8 311 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 EBF2Q9HAK2 575 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 KCNK9Q9NPC2 374 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 DNAJC17Q9NVM6 304 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 CYP39A1Q9NYL5 469 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 NKIRAS1Q9NYS0 192 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 RBAKQ9NYW8 714 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 FETUBQ9UGM5 382 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 DNPEPQ9ULA0 475 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 DOCK5Q9H7D0 1870 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 SSC5DA1L4H1 1573 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 hCG_1818297A0A087WSY0 165 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 A0A1B0GUA9 196 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 C3orf70A6NLC5 250 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 K7ERI5 159 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 NDC80O14777 642 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TJP3O95049 919 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EGFRP00533 1210 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CALB1P05937 261 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ITGAVP06756 1048 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CCNYL3P0C7X3 344 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 KRT10P13645 584 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TCF4P15884 667 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 STX2P32856 288 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CDKN2BP42772 138 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ALDH5A1P51649 535 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 POLGP54098 1239 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 VCPP55072 806 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RPL7AP62424 266 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 IL9RQ01113 521 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SP2Q02086 613 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 OGDHQ02218 1023 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TAP1Q03518 808 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 GNPTABQ3T906 1256 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 MTERF2Q49AM1 385 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ATP13A4Q4VNC1 1196 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SPDYAQ5MJ70 313 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SCARA3Q6AZY7 606 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CIAPIN1Q6FI81 312 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SNRNP48Q6IEG0 339 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 MFSD7Q6UXD7 560 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ZPBP2Q6X784 338 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TBC1D1Q86TI0 1168 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PRUNE1Q86TP1 453 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ECHDC2Q86YB7 292 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 WDR49Q8IV35 697 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 BRSK2Q8IWQ3 736 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SRRM1Q8IYB3 904 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SCYL3Q8IZE3 742 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SIX5Q8N196 739 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 WDTC1Q8N5D0 677 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF280CQ8ND82 737 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 GDAP1Q8TB36 358 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SLC35B2Q8TB61 432 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ADAM32Q8TC27 787 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM143Q96AN5 459 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 LRCH3Q96II8 777 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RMDN2Q96LZ7 410 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 FAM118BQ9BPY3 351 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PRR14Q9BWN1 585 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 FRMD8P1Q9BZ68 369 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF518BQ9C0D4 1074 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PCDH9Q9HC56 1237 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 MLXIPLQ9NP71 852 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SSU72Q9NP77 194 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SAYSD1Q9NPB0 183 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EVA1BQ9NVM1 165 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 DNAAF2Q9NVR5 837 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 DDX56Q9NY93 547 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RNF181Q9P0P0 153 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SENP1Q9P0U3 644 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 FBXO40Q9UH90 709 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SLC24A2Q9UI40 661 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ZMYND8Q9ULU4 1186 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SHOC2Q9UQ13 582 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EFR3BQ9Y2G0 817 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 STARD13Q9Y3M8 1113 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 MYH9P35579 1960 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EXOC1LA0A1B0GW35 172 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 C19orf81C9J6K1 198 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RASA4BC9J798 803 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PI4K2BG5E9Z4 385 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 IGF2BP3O00425 579 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ABLIM1O14639 778 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RASA4O43374 803 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TYROBPO43914 113 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ADCY3O60266 1144 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PRMT3O60678 531 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 WFS1O76024 890 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms