RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 C17orf75Q9HAS0 396 aa16.84■□□□□ 0.29
VARS2-212ENST00000542001 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 H3BRJ5 948 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 GPD1P21695 349 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 ACAT1P24752 427 aaKnown RBP16.83■□□□□ 0.29
VARS2-212ENST00000542001 PGM1P36871 562 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 MARSP56192 900 aaKnown RBP16.83■□□□□ 0.29
VARS2-212ENST00000542001 COPS2P61201 443 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 TNFAIP2Q03169 654 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 CCNG2Q16589 344 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 EEF1DP3Q658K8 133 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 ATG16L1Q676U5 607 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 EXOC3L1Q86VI1 746 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 SPOCK2Q92563 424 aa16.83■□□□□ 0.29
VARS2-212ENST00000542001 DUOX1Q9NRD9 1551 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 LCA5LO95447 670 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 UBA1P22314 1058 aaKnown RBP16.83■□□□□ 0.28
VARS2-212ENST00000542001 BMT2Q1RMZ1 405 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 SLC26A7Q8TE54 656 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 VCX3BQ9H321 246 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 SPC25Q9HBM1 224 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 WHRNQ9P202 907 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 ARMCX1Q9P291 453 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 USP18Q9UMW8 372 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 APOBEC2Q9Y235 224 aaKnown RBP16.83■□□□□ 0.28
VARS2-212ENST00000542001 B2RBV5 119 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 PYGBP11216 843 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 ADRA1DP25100 572 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 ELK3P41970 407 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 NRLP54845 237 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 CRADDP78560 199 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 CENPCQ03188 943 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 MAMLD1Q13495 774 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 FAM172AQ8WUF8 416 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 FAM136AQ96C01 138 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 OSMRQ99650 979 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 SPATC1LQ9H0A9 340 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 CYP39A1Q9NYL5 469 aa16.83■□□□□ 0.28
VARS2-212ENST00000542001 SPECC1L-ADORA2AF8WAN1 911 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 CFHP08603 1231 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 SULT1E1P49888 294 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 KCNJ2P63252 427 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 PTPN11Q06124 597 aaPredicted RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 CHI3L2Q15782 390 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 DENND5BQ6ZUT9 1274 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 SLC5A4Q9NY91 659 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 ERAP1Q9NZ08 941 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 DFFAO00273 331 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 DGKIO75912 1065 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 BGNP21810 368 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 TPD52P55327 224 aaPredicted RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 GCNT1Q02742 428 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 ISLR2Q6UXK2 745 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 RGS9BPQ6ZS82 235 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 ZNF677Q86XU0 584 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 EXD1Q8NHP7 514 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 CPSF2Q9P2I0 782 aaKnown RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 TAF1P21675 1872 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 USP12O75317 370 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 ADSSP30520 456 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 GEMIN4P57678 1058 aaKnown RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 THOC5Q13769 683 aaKnown RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 NFIL3Q16649 462 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 SPOUT1Q5T280 376 aaKnown RBP16.82■□□□□ 0.28
VARS2-212ENST00000542001 ZCCHC23Q6ZST2 131 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 NLRP9Q7RTR0 991 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 PPIL6Q8IXY8 311 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 HASPINQ8TF76 798 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 NCAPGQ9BPX3 1015 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
VARS2-212ENST00000542001 RFC5P40937 340 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 NDST1P52848 882 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 SYDE1Q6ZW31 735 aaPredicted RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 EXOC8Q8IYI6 725 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 C12orf29Q8N999 325 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 OR6P1Q8NGX9 317 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 MANSC1Q9H8J5 431 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 DPP3Q9NY33 737 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 GTSE1Q9NYZ3 720 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 ENO4A6NNW6 628 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 ADCY3O60266 1144 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 PDCD6IPQ8WUM4 868 aaKnown RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 FAM193BQ96PV7 902 aaPredicted RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 SH3GL2Q99962 352 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 PSTPIP1O43586 416 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 AVILO75366 819 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 FASTKD3Q14CZ7 662 aaKnown RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 PLCB4Q15147 1175 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 HSDL1Q3SXM5 330 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 TCP10LQ8TDR4 215 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 SPDYE16A6NNV3 312 aaPredicted RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 GOLGA8TH3BQL2 631 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 ANP32DO95626 131 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 C6orf222P0C671 652 aaPredicted RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 CYP2C9P11712 490 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 TCN1P20061 433 aaPredicted RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 MIPP30301 263 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 RABGAP1LQ5R372 815 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms