RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SLC10A6Q3KNW5 377 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 ZCWPW2Q504Y3 356 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 WDR44Q5JSH3 913 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 CENPPQ6IPU0 288 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 CRELD2Q6UXH1 353 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 CACNA2D4Q7Z3S7 1137 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 RALGPS2Q86X27 583 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 ARID3BQ8IVW6 561 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 GPD1LQ8N335 351 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 APPL2Q8NEU8 664 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 GAB3Q8WWW8 586 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 C18orf25Q96B23 403 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 ATXN3LQ9H3M9 355 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 RPF1Q9H9Y2 349 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 DMAC2Q9NW81 257 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 HSPBP1Q9NZL4 362 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 ZMIZ1Q9ULJ6 1067 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 SLC8A2Q9UPR5 921 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 YIPF1Q9Y548 306 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 EPG5Q9HCE0 2579 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 ANK1P16157 1881 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 MYBPHLA2RUH7 354 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 PSMA7O14818 248 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TM4SF5O14894 197 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 MEFVO15553 781 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 PAPSS2O95340 614 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 CXCL8P10145 99 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 SPINK2P20155 84 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 MPLP40238 635 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TNFSF9P41273 254 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ALDH1A3P47895 512 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ACOT2P49753 483 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 NOVA1P51513 510 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 EPHB3P54753 998 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 MLLT6P55198 1093 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TNK2Q07912 1038 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 PLD1Q13393 1074 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 MRPL58Q14197 206 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ENOX2Q16206 610 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 EDRF1Q3B7T1 1238 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 SEZ6Q53EL9 994 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 CCDC183Q5T5S1 534 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 GPR158Q5T848 1215 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TCEAL6Q6IPX3 200 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 FOXR2Q6PJQ5 311 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 UNQ6494/PRO21346Q6UXR6 183 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 SMYD4Q8IYR2 804 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 XXYLT1Q8NBI6 393 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 DHTKD1Q96HY7 919 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ZMAT2Q96NC0 199 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 FAM213AQ9BRX8 229 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 LSM14BQ9BX40 385 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 PCIF1Q9H4Z3 704 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ASB7Q9H672 318 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TRPV4Q9HBA0 871 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 DERAQ9Y315 318 aa9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 TIMM13Q9Y5L4 95 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-212ENST00000541770 ZNF233A6NK53 670 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 PPP1R3GB7ZBB8 358 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 BIN1O00499 593 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 GIPC1O14908 333 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 CLIC2O15247 247 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 MAPK13O15264 365 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 IL18RAPO95256 599 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 NR3C1P04150 777 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 RPL13P26373 211 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 GABRR2P28476 465 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 RPL9P32969 192 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 CDR1P51861 262 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 EPHA5P54756 1037 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 CREB5Q02930 508 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 YWHAHQ04917 246 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 LRRC63Q05C16 580 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 PPP2R3AQ06190 1150 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 SPAG1Q07617 926 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 FCHO2Q0JRZ9 810 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 DUSP4Q13115 394 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 CCINQ13939 588 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 ARHGAP15Q53QZ3 475 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 ISM2Q6H9L7 571 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 PKN3Q6P5Z2 889 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 USP37Q86T82 979 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 NT5DC4Q86YG4 428 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 BRSK2Q8IWQ3 736 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 TMEM130Q8N3G9 435 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 MLKLQ8NB16 471 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 ZSWIM2Q8NEG5 633 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 BPIFB1Q8TDL5 484 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 SYAP1Q96A49 352 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 SAAL1Q96ER3 474 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 LOXL4Q96JB6 756 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 SUSD3Q96L08 255 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
CLSTN3-212ENST00000541770 VPS45Q9NRW7 570 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms