RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 MTBPQ96DY7 904 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF486Q96H40 463 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PLEKHA8Q96JA3 519 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 FAM20AQ96MK3 541 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF578Q96N58 590 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 LRRC37BQ96QE4 947 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 RANBP9Q96S59 729 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PLEKHF1Q96S99 279 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 KRT12Q99456 494 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 LRRC1Q9BTT6 524 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 C9orf16Q9BUW7 83 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MKRN2Q9H000 416 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TMEM245Q9H330 911 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SLA2Q9H6Q3 261 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF696Q9H7X3 374 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 RMND5AQ9H871 391 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MAGEE1Q9HCI5 957 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TUFT1Q9NNX1 390 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ATP13A2Q9NQ11 1180 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 STARD7Q9NQZ5 370 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 KCNQ5Q9NR82 932 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 DDX18Q9NVP1 670 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 NDE1Q9NXR1 346 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TLR7Q9NYK1 1049 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 EXTL2Q9UBQ6 330 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PRKAG3Q9UGI9 489 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TEKT2Q9UIF3 430 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CNOT7Q9UIV1 285 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CDH7Q9ULB5 785 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 DUSP12Q9UNI6 340 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 NOVA2Q9UNW9 492 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ERGIC3Q9Y282 383 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CAB39Q9Y376 341 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 IPPQ9Y573 584 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 AP4S1Q9Y587 144 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MAD1L1Q9Y6D9 718 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 IVNS1ABPQ9Y6Y0 642 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ANKARQ7Z5J8 1434 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CYP2D7A0A087X1C5 515 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TYW5A2RUC4 315 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SOWAHDA6NJG2 315 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CFAP99D6REC4 459 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 H0Y858 1186 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 H0YGN5 161 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 H7C0C1 242 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 GNB5O14775 395 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CLOCKO15516 846 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DENRO43583 198 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 NCK2O43639 380 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 NUAK1O60285 661 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 PHF2O75151 1096 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 PSIP1O75475 530 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CIB2O75838 187 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 NDUFA10O95299 355 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 APBB3O95704 486 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 C6orf222P0C671 652 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SPATA31D3P0C874 917 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RARGP13631 454 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 HPGDP15428 266 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF18P17022 549 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ITIH1P19827 911 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CYP3A5P20815 502 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 F8A1P23610 371 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 HSD17B3P37058 310 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 HADHAP40939 763 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 IARSP41252 1262 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 PTPN9P43378 593 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CLK3P49761 638 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SMCPP49901 116 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 VCPP55072 806 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 AP1S2P56377 157 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CABP4P57796 275 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 PLIN5Q00G26 463 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CREB5Q02930 508 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 FOLH1Q04609 750 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF844Q08AG5 666 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CSTF3Q12996 717 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 GALNT3Q14435 633 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 KRT32Q14532 448 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF124Q15973 351 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SLC15A2Q16348 729 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DUSP7Q16829 419 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TRMT5Q32P41 509 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 MSS51Q4VC12 460 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SCARA3Q6AZY7 606 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 GTF2IRD2BQ6EKJ0 949 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DCLRE1AQ6PJP8 1040 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TREML4Q6UXN2 200 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SPATA31D4Q6ZUB0 917 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 BNIPLQ7Z465 357 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 GTF2IRD2Q86UP8 949 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF589Q86UQ0 364 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SATL1Q86VE3 508 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF410Q86VK4 478 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RASSF3Q86WH2 238 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms