RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PSMC3P17980 439 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 RBP5P82980 135 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 WASHC2DQ5SRD0 308 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 RNF148Q8N7C7 305 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 IL17RBQ9NRM6 502 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 TAGLN3Q9UI15 199 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
EIF3A-203ENST00000541549 CSPG5O95196 566 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 MLH1P40692 756 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 GLRBP48167 497 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 VCPP55072 806 aaKnown RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PPATQ06203 517 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 MTMR2Q13614 643 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 MXD4Q14582 209 aaPredicted RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 BOLA3Q53S33 107 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 DCAF6Q58WW2 860 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 TMPRSS6Q8IU80 811 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 MICU2Q8IYU8 434 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 IQCKQ8N0W5 287 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 BTBD10Q9BSF8 475 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 NT5C1AQ9BXI3 368 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PLEKHA5Q9HAU0 1116 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 AFF4Q9UHB7 1163 aaKnown RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 BLOC1S6Q9UL45 172 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 TBCCQ15814 346 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PCSK7Q16549 785 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 FRMD8Q9BZ67 464 aaPredicted RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 DNAJC18Q9H819 358 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 NEXMIFQ5QGS0 1516 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 TLR2O60603 784 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ENTPD5O75356 428 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 NFIAQ12857 509 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ITPK1Q13572 414 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 EP400NLQ6ZTU2 488 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 KCTD17Q8N5Z5 321 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 NDFIP2Q9NV92 336 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 GPATCH2LQ9NWQ4 482 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ARHGEF37A1IGU5 675 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 TULP2O00295 520 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 CES2O00748 559 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 CYTH3O43739 400 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 GLRA3O75311 464 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 FKBP6O75344 327 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 KRT8P05787 483 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 THRAP10827 490 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ABCE1P61221 599 aaKnown RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 CNGA2Q16280 664 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PLD3Q8IV08 490 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 DDHD1Q8NEL9 900 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PPHLN1Q8NEY8 458 aaKnown RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 PABPC5Q96DU9 382 aaKnown RBP12.51□□□□□ -0.41
EIF3A-203ENST00000541549 KLHL4Q9C0H6 718 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 EFCAB1Q9HAE3 211 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
EIF3A-203ENST00000541549 ZSCAN9O15535 394 aaPredicted RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 KCNA4P22459 653 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 NPTX2P47972 431 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 STX5Q13190 355 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 RBBP7Q16576 425 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 TRIM16LQ309B1 348 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 MIIPQ5JXC2 388 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 TCHHL1Q5QJ38 904 aaPredicted RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 SPOCD1Q6ZMY3 1216 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 TAS2R42Q7RTR8 314 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 CD302Q8IX05 232 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 DCLK3Q9C098 648 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 ACP6Q9NPH0 428 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 TGM2P21980 687 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 NFKBIAP25963 317 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 AUHQ13825 339 aaKnown RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 PDK1Q15118 436 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 ANKRD27Q96NW4 1050 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 CASS4Q9NQ75 786 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 KLRC4O43908 158 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 MT-CO1P00395 513 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 COL3A1P02461 1466 aaPredicted RBP12.5□□□□□ -0.41
EIF3A-203ENST00000541549 ALBP02768 609 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 RALBP11234 206 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 HLA-DPA1P20036 260 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 ELK3P41970 407 aa12.5□□□□□ -0.41
EIF3A-203ENST00000541549 DMC1Q14565 340 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms