RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 HOOK2Q96ED9 719 aa3.84□□□□□ -1.79
KDM5A-208ENST00000541335 HSPBAP1Q96EW2 488 aa3.84□□□□□ -1.79
KDM5A-208ENST00000541335 NELL2Q99435 816 aa3.84□□□□□ -1.79
KDM5A-208ENST00000541335 NUP88Q99567 741 aaPredicted RBP3.84□□□□□ -1.79
KDM5A-208ENST00000541335 AASDHPPTQ9NRN7 309 aa3.84□□□□□ -1.79
KDM5A-208ENST00000541335 ZDHHC8Q9ULC8 765 aa3.84□□□□□ -1.79
KDM5A-208ENST00000541335 POLHQ9Y253 713 aa3.84□□□□□ -1.79
KDM5A-208ENST00000541335 M0QYG6 137 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 QSOX1O00391 747 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 SLC16A3O15427 465 aaKnown RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 IL33O95760 270 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 TUBB4AP04350 444 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 IL6RP08887 468 aaPredicted RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 PDCP20941 246 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 SFPQP23246 707 aaKnown RBP eCLIP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 CYP2C18P33260 490 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 ZNF134P52741 427 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 EEFSECP57772 596 aaKnown RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 NOGQ13253 232 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 SLC2A7Q6PXP3 512 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 TMEM108Q6UXF1 575 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 USP45Q70EL2 814 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 WDR53Q7Z5U6 358 aaPredicted RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 CATIPQ7Z7H3 387 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 FAM46DQ8NEK8 389 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 DDX17Q92841 729 aaKnown RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 TNPO1Q92973 898 aaKnown RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 RHOBTB2Q9BYZ6 727 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 GTPBP4Q9BZE4 634 aaKnown RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 MRPL46Q9H2W6 279 aaKnown RBP3.83□□□□□ -1.8
KDM5A-208ENST00000541335 WDCPQ9H6R7 721 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 SH2B3Q9UQQ2 575 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 TBC1D30Q9Y2I9 924 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 SOGA1O94964 1423 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 GOLGA3Q08378 1498 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 HMGXB3Q12766 1538 aa3.83□□□□□ -1.8
KDM5A-208ENST00000541335 E2F8A0AVK6 867 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 ADAMTS3O15072 1205 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 TLR5O60602 858 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 TOP3BO95985 862 aaKnown RBP3.82□□□□□ -1.8
KDM5A-208ENST00000541335 GNAI2P04899 355 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 POU2F2P09086 479 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 PF4V1P10720 104 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 CLCN2P51788 898 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 HK3P52790 923 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 CYP4F2P78329 520 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 SP2Q02086 613 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 PCID2Q5JVF3 399 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 TREML2Q5T2D2 321 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 FAM160B1Q5W0V3 765 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 ICE2Q659A1 982 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 HEATR3Q7Z4Q2 680 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.82□□□□□ -1.8
KDM5A-208ENST00000541335 RGMAQ96B86 450 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 SLC46A1Q96NT5 459 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.82□□□□□ -1.8
KDM5A-208ENST00000541335 HESX1Q9UBX0 185 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 ABCF2Q9UG63 623 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 IP6K2Q9UHH9 426 aa3.82□□□□□ -1.8
KDM5A-208ENST00000541335 FEZ2Q9UHY8 353 aaPredicted RBP3.82□□□□□ -1.8
KDM5A-208ENST00000541335 NCAPD3P42695 1498 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 CEP164Q9UPV0 1460 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 TNIKQ9UKE5 1360 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 TRIM38O00635 465 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 PPEF2O14830 753 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 DCLK1O15075 740 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 SLC16A6O15403 523 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 AKAP10O43572 662 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 DNAJB5O75953 348 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 ONECUT2O95948 504 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 AHSGP02765 367 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 PIM1P11309 404 aaPredicted RBP3.81□□□□□ -1.8
KDM5A-208ENST00000541335 ENGP17813 658 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 VCAM1P19320 739 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 AKAP5P24588 427 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 EPHB1P54762 984 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 PLEKHG6Q3KR16 790 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 THEMIS2Q5TEJ8 643 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 SFRP4Q6FHJ7 346 aaPredicted RBP3.81□□□□□ -1.8
KDM5A-208ENST00000541335 NAPRTQ6XQN6 538 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 CATSPERGQ6ZRH7 1159 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 CHSY1Q86X52 802 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 PPP1R3BQ86XI6 285 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 CAMKK2Q96RR4 588 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 MACROD1Q9BQ69 325 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 FSD1LQ9BXM9 530 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 RTFDC1Q9BY42 306 aaPredicted RBP3.81□□□□□ -1.8
KDM5A-208ENST00000541335 SPRTNQ9H040 489 aaPredicted RBP3.81□□□□□ -1.8
KDM5A-208ENST00000541335 DUSP22Q9NRW4 184 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 SERTAD3Q9UJW9 196 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 SSX2IPQ9Y2D8 614 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 ANKRD6Q9Y2G4 727 aa3.81□□□□□ -1.8
KDM5A-208ENST00000541335 CEP162Q5TB80 1403 aa3.8□□□□□ -1.8
KDM5A-208ENST00000541335 SMIM35A0A1B0GVV1 85 aa3.8□□□□□ -1.8
KDM5A-208ENST00000541335 TYRP14679 529 aa3.8□□□□□ -1.8
KDM5A-208ENST00000541335 PPIFP30405 207 aaKnown RBP3.8□□□□□ -1.8
KDM5A-208ENST00000541335 RAB27AP51159 221 aa3.8□□□□□ -1.8
KDM5A-208ENST00000541335 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
KDM5A-208ENST00000541335 PGS1Q32NB8 556 aa3.8□□□□□ -1.8
KDM5A-208ENST00000541335 ODR4Q5SWX8 454 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms