RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 CCND1P24385 295 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 MFAP3P55082 362 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 OSTNP61366 133 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 TTC8Q8TAM2 541 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 CFHR5Q9BXR6 569 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 HMX1Q9NP08 348 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 CORO1CQ9ULV4 474 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 SNX3O60493 162 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 ZNF131P52739 623 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 CAPSQ13938 189 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 MAP3K21Q5TCX8 1036 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 GDF6Q6KF10 455 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 TAS1R3Q7RTX0 852 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 NT5C1BQ96P26 610 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 TRPV6Q9H1D0 765 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 HAO1Q9UJM8 370 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 A0A087WZ62 844 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 TMEM120BA0PK00 339 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 HNRNPDLO14979 420 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 ENTPD5O75356 428 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 FMO1Q01740 532 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 AUHQ13825 339 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 ZBTB41Q5SVQ8 909 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 CRELD2Q6UXH1 353 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 SRRM1Q8IYB3 904 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 SEC14L1Q92503 715 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 DDX50Q9BQ39 737 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 FDXACB1Q9BRP7 624 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 FAM213AQ9BRX8 229 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 DHX33Q9H6R0 707 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 TTC7AQ9ULT0 858 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 O00370 1275 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 C22orf31O95567 290 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 PLS3P13797 630 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 TMEM40Q8WWA1 233 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 PDLIM7Q9NR12 457 aa15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 USP15Q9Y4E8 981 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-210ENST00000541286 CCL5P13501 91 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 TNNI1P19237 187 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 PSEN2P49810 448 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 PEX5P50542 639 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 C1orf220Q5T0J3 134 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 TAOK1Q7L7X3 1001 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 PHC3Q8NDX5 983 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 HAUS1Q96CS2 278 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 WNT8AQ9H1J5 351 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 NRBP2Q9NSY0 501 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 PARP2Q9UGN5 583 aa15.08■□□□□ 0.01
SFSWAP-210ENST00000541286 LRRD1A4D1F6 860 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 PI4K2BG5E9Z4 385 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 F2P00734 622 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 PAEPP09466 180 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 NLRP11P59045 1033 aaKnown RBP15.08■□□□□ 0
SFSWAP-210ENST00000541286 SPOPLQ6IQ16 392 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
SFSWAP-210ENST00000541286 CPB2Q96IY4 423 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 OSMRQ99650 979 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 C11orf70Q9BRQ4 267 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.08■□□□□ 01e-7■■■■■ 36
SFSWAP-210ENST00000541286 CXCL16Q9H2A7 254 aa15.08■□□□□ 0
SFSWAP-210ENST00000541286 CD58P19256 250 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 RRM1P23921 792 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 MMP13P45452 471 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ITGA8P53708 1063 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 LAMTOR4Q0VGL1 99 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 LAMB3Q13751 1172 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 SLMAPQ14BN4 828 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 KRT39Q6A163 491 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ZBTB33Q86T24 672 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 EXOC3L1Q86VI1 746 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 KMT5AQ9NQR1 393 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 SAGE1Q9NXZ1 904 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ASAP2O43150 1006 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 LYPLA2O95372 231 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 NUDT17P0C025 328 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 IRF5Q13568 498 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 C11orf63Q6NUN7 778 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 VSIG1Q86XK7 387 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 C7orf31Q8N865 590 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 TXLNGYQ9BZA5 131 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 NSRP1Q9H0G5 558 aaKnown RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 INO80B-WBP1J3KQ70 363 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 DGAT1O75907 488 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 AGTP01019 485 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 BRAFP15056 766 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 GM2AP17900 193 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 STX2P32856 288 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 MTHFD1LQ6UB35 978 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ZNF365Q70YC5 407 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 PLPPR4Q7Z2D5 763 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 SPOCK2Q92563 424 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ACSF2Q96CM8 615 aaPredicted RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 PGM2Q96G03 612 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 TARS2Q9BW92 718 aaKnown RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 INO80BQ9C086 356 aaPredicted RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 SENP6Q9GZR1 1112 aaPredicted RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 HOMER3Q9NSC5 361 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 ANKEF1Q9NU02 776 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms