RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ZBED8Q8IZ13 594 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 PTPRN2Q92932 1015 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 MTMR12Q9C0I1 747 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 PLAC1Q9HBJ0 212 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 CISHQ9NSE2 258 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 TCEAL9Q9UHQ7 104 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ADCY3O60266 1144 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 TARSP26639 723 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ABL2P42684 1182 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 RNASELQ05823 741 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 TFDP1Q14186 410 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SLFN12LQ6IEE8 588 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CATSPERGQ6ZRH7 1159 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 POLNQ7Z5Q5 900 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ANKMY2Q8IV38 441 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 FAM13CQ8NE31 585 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ZNF75CPQ92670 426 aaPredicted RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 MIPEPQ99797 713 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CCDC77Q9BR77 488 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ETNK1Q9HBU6 452 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 DONSONQ9NYP3 566 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 USH1CQ9Y6N9 552 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ZBTB42B2RXF5 422 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 K7ERI5 159 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CALB1P05937 261 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 DHRS4L1P0CG22 281 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SSTR1P30872 391 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 RPL22P35268 128 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 NRLP54845 237 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 PDIA2Q13087 525 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SPARCL1Q14515 664 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 WDR49Q8IV35 697 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 BANPQ8N9N5 519 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 GIMAP7Q8NHV1 300 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CXorf38Q8TB03 319 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 PSMC3IPQ9P2W1 217 aaPredicted RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 HAO1Q9UJM8 370 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 EFR3BQ9Y2G0 817 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 STK38LQ9Y2H1 464 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 LRRIQ4A6NIV6 560 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SOCS7O14512 581 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 DIAPH2O60879 1101 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 STAM2O75886 525 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 LDHAP00338 332 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 PROZP22891 400 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ADRA1DP25100 572 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ETV4P43268 484 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SLC8A3P57103 927 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 OTUD4Q01804 1114 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SMYD5Q6GMV2 418 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 PPP1R2P3Q6NXS1 205 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 DNAJC24Q6P3W2 148 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CAPN12Q6ZSI9 719 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 BBS12Q6ZW61 710 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ACTL9Q8TC94 416 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 FAXDC2Q96IV6 333 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ACSS3Q9H6R3 686 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 KCNK13Q9HB14 408 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 NOP53Q9NZM5 478 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 SENP1Q9P0U3 644 aa10.03□□□□□ -0.8
CNOT4-212ENST00000541284 CPSF3Q9UKF6 684 aaKnown RBP10.03□□□□□ -0.8
CNOT4-212ENST00000541284 GOLGA8SH3BPF8 625 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 GOLGA8MH3BSY2 632 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 CTCFP49711 727 aaPredicted RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 PIGHQ14442 188 aaPredicted RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 CRYMQ14894 314 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 TAF5Q15542 800 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 CEP128Q6ZU80 1094 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 BZW1Q7L1Q6 419 aaKnown RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 UNC45BQ8IWX7 931 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 INPP5DQ92835 1189 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 UPF1Q92900 1129 aaKnown RBP eCLIP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 SDCBP2Q9H190 292 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 PEX10O60683 326 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 CBX6O95503 412 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 SSR1P43307 286 aaKnown RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 GEMIN4P57678 1058 aaKnown RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 CNTN2Q02246 1040 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 LVRNQ6Q4G3 990 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 ZPBP2Q6X784 338 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 RFWD2Q8NHY2 731 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 DEPTORQ8TB45 409 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 PRR11Q96HE9 360 aaPredicted RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 ZNF518BQ9C0D4 1074 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 NIF3L1Q9GZT8 377 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 PTPRHQ9HD43 1115 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 DDX56Q9NY93 547 aaKnown RBP10.02□□□□□ -0.81
CNOT4-212ENST00000541284 CNTN3Q9P232 1028 aa10.02□□□□□ -0.81
CNOT4-212ENST00000541284 LRRD1A4D1F6 860 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms