RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 CRYMQ14894 314 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 C4orf33Q8N1A6 199 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 ERP27Q96DN0 273 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 GRID1Q9ULK0 1009 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 POLIQ9UNA4 740 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 ZNF148Q9UQR1 794 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 MCM3APO60318 1980 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 LIASO43766 372 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 ABHD2P08910 425 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 PKN2Q16513 984 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 ZNF699Q32M78 642 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 WDR49Q8IV35 697 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 FBF1Q8TES7 1133 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 UTP4Q969X6 686 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 ZNF570Q96NI8 536 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 TMEM237Q96Q45 408 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 MAF1Q9H063 256 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 SMARCAD1Q9H4L7 1026 aa13.17□□□□□ -0.3
RNF4-222ENST00000541204 CPSF3Q9UKF6 684 aaKnown RBP13.17□□□□□ -0.3
RNF4-222ENST00000541204 DNALI1O14645 258 aaPredicted RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 VTNP04004 478 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 INSRRP14616 1297 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 KRT15P19012 456 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 ARSEP51690 589 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 CDH8P55286 799 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 ATP11AP98196 1134 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 PLPPR4Q7Z2D5 763 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 RIBC1Q8N443 379 aaPredicted RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 HAUS1Q96CS2 278 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 CPB2Q96IY4 423 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 ABLIM1O14639 778 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 LGR5O75473 907 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 CD19P15391 556 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 TARSP26639 723 aaKnown RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 CDC25CP30307 473 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 SKIV2L2P42285 1042 aaKnown RBP13.16□□□□□ -0.3
RNF4-222ENST00000541204 ENPEPQ07075 957 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 MCL1Q07820 350 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 GPS1Q13098 491 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 PLEKHA7Q6IQ23 1121 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 MPZL3Q6UWV2 235 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 VSIG1Q86XK7 387 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
RNF4-222ENST00000541204 A0A087WZ62 844 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 HOXC6P09630 235 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 ADORA2AP29274 412 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 ADCYAP1R1P41586 468 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SNAPC2Q13487 334 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 FDXACB1Q9BRP7 624 aaPredicted RBP13.15□□□□□ -0.3
RNF4-222ENST00000541204 NIF3L1Q9GZT8 377 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 MROH8Q9H579 483 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 HAO1Q9UJM8 370 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 DNAH12Q6ZR08 3092 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SBF1O95248 1867 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 IGKV6-21A0A0C4DH24 114 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 ACKR2O00590 384 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 NFICP08651 508 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SLC8A3P57103 927 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 LMNB2Q03252 620 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
RNF4-222ENST00000541204 ZBED8Q8IZ13 594 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 MAB21L3Q8N8X9 362 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 MCEEQ96PE7 176 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SLITRK1Q96PX8 696 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 LRRC37BQ96QE4 947 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 SMC6Q96SB8 1091 aa13.15□□□□□ -0.3
RNF4-222ENST00000541204 CDT1Q9H211 546 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms